RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-205	ENST00000625662	SEH1L	Q96EE3	360 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	KIR2DS2	P43631	304 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	NPY4R	P50391	375 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	ATP5J2	P56134	94 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	CCDC144NL	Q6NUI1	221 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	C12orf57	Q99622	126 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662		F5H5P2	479 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	RECK	O95980	971 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	GPM6A	P51674	278 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	BTN1A1	Q13410	526 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	RBMS2	Q15434	407 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	LSMEM1	Q8N8F7	131 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	PLPP7	Q8NBV4	271 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	SLC25A40	Q8TBP6	338 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	LGALS14	Q8TCE9	139 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	VWCE	Q96DN2	955 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	OR5B12	Q96R08	314 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	OR2S2	Q9NQN1	319 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	NCBP2L	A6PVI3	153 aa	Known RBP	10.44	□□□□□ -0.74
CHD2-205	ENST00000625662		A8MXE2	369 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	TGOLN2	O43493	480 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	EMX1	Q04741	257 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	UBE3D	Q7Z6J8	389 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	ATG4D	Q86TL0	474 aa	Predicted RBP	10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	NMNAT2	Q9BZQ4	307 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	CHST6	Q9GZX3	395 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	OR51E2	Q9H255	320 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	GCM1	Q9NP62	436 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662	CLN8	Q9UBY8	286 aa		10.44	□□□□□ -0.74
CHD2-205	ENST00000625662		F6UZH7	168 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	FAM87A	P0C7U9	286 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	GABRA6	Q16445	453 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	FDCSP	Q8NFU4	85 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	ZNF665	Q9H7R5	613 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	ST3GAL6	Q9Y274	331 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	SIGLEC7	Q9Y286	467 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	SIPA1L1	O43166	1804 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	RP1L1	Q8IWN7	2480 aa	Predicted RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	NDUFA2	O43678	99 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	CLDN1	O95832	211 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	CA6	P23280	308 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	INPP5J	Q15735	1006 aa	Predicted RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	GUK1	Q16774	197 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	HEPHL1	Q6MZM0	1159 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	B3GLCT	Q6Y288	498 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	CALHM3	Q86XJ0	350 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	UHRF2	Q96PU4	802 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	THYN1	Q9P016	225 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	OTOF	Q9HC10	1997 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	CRYM-AS1	A6NIL9	109 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	FAM57A	Q8TBR7	257 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	GMPR2	Q9P2T1	348 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	ZNF724	A8MTY0	619 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	GOSR2	O14653	212 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	RPS25	P62851	125 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	PNLIPRP3	Q17RR3	467 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	ZNF674	Q2M3X9	581 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662		Q6ZPB1	254 aa	Predicted RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	COMMD1	Q8N668	190 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	DAZAP1	Q96EP5	407 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	ADTRP	Q96IZ2	230 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	PTDSS2	Q9BVG9	487 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	CISD1	Q9NZ45	108 aa	Known RBP	10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	FBXL2	Q9UKC9	423 aa		10.43	□□□□□ -0.74
CHD2-205	ENST00000625662	RAP2B	P61225	183 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	NANOGP1	Q8N7R0	232 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	OR51D1	Q8NGF3	324 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	GRAMD2B	Q96HH9	432 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	IL20	Q9NYY1	176 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	HMX3	A6NHT5	357 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662		K7EPK0	472 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	FADS1	O60427	444 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	FUT3	P21217	361 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	CAV3	P56539	151 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	PMP22	Q01453	160 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	TMEM41B	Q5BJD5	291 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	FAM71E2	Q8N5Q1	922 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	SMIM19	Q96E16	107 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	CNTNAP3B	Q96NU0	1288 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	SPSB2	Q99619	263 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	PLCXD1	Q9NUJ7	323 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	HIF1AN	Q9NWT6	349 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	NUPL2	O15504	423 aa	Known RBP	10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	TOX4	O94842	621 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	EPPIN	O95925	133 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	PTBP1	P26599	531 aa	Known RBP eCLIP	10.42	□□□□□ -0.74	2e-6	■■■■□ 26
CHD2-205	ENST00000625662	WNT3	P56703	355 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	DEDD2	Q8WXF8	326 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	ARL11	Q969Q4	196 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	HYLS1	Q96M11	299 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	CIB3	Q96Q77	187 aa	Predicted RBP	10.42	□□□□□ -0.74
CHD2-205	ENST00000625662		A0A0B4J203	849 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	SERPINE3	A8MV23	424 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	HRAS	P01112	189 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	CA5A	P35218	305 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	CSN1S1	P47710	185 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	ZNF136	P52737	540 aa		10.42	□□□□□ -0.74
CHD2-205	ENST00000625662	DHODH	Q02127	395 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms