RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 CHRM2P08172 466 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 HOXB5P09067 269 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 HOXA5P20719 270 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 CCR5P51681 352 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 EMP2P54851 167 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 QRFPP83859 136 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 NSDHLQ15738 373 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ZNF239Q16600 458 aaKnown RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 C21orf62-AS1Q17RA5 79 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 CDPF1Q6NVV7 123 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 DHRS11Q6UWP2 260 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 COX15Q7KZN9 410 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ANGPTL5Q86XS5 388 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ASB10Q8WXI3 467 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TMEM234Q8WY98 164 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ADAT3Q96EY9 351 aaPredicted RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 GAR1Q9NY12 217 aaKnown RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 C7orf77A4D0Y5 90 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TTRP02766 147 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 IL11P20809 199 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 ZNF93P35789 620 aaPredicted RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 HMGN3Q15651 99 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 FAM24BQ8N5W8 94 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 SLAMF6Q96DU3 332 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 SAT2Q96F10 170 aaPredicted RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 KIRREL1Q96J84 757 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 NUDT16L1Q9BRJ7 211 aaKnown RBP7.72□□□□□ -1.17
VCL-207ENST00000624354 MESP1Q9BRJ9 268 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 RNF126Q9BV68 326 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 FN3KRPQ9HA64 309 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 FAM206AQ9NX38 181 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 CYP8B1Q9UNU6 501 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 TIMM10BQ9Y5J6 103 aa7.72□□□□□ -1.17
VCL-207ENST00000624354 A0A087X0M5 115 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 A0A1B0GX30 115 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 LILRA5A6NI73 299 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 FTCDNL1E5RQL4 147 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 MS4A18H0YCH9 400 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 MBTPS2O43462 519 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 IFNA10P01566 189 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 DDTP30046 118 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 CDX1P47902 265 aaPredicted RBP7.71□□□□□ -1.17
VCL-207ENST00000624354 POU3F1Q03052 451 aaPredicted RBP7.71□□□□□ -1.17
VCL-207ENST00000624354 KIAA0141Q14154 515 aaPredicted RBP7.71□□□□□ -1.17
VCL-207ENST00000624354 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 AWAT1Q58HT5 328 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 ZNF585AQ6P3V2 769 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 H1FNTQ75WM6 255 aaPredicted RBP7.71□□□□□ -1.17
VCL-207ENST00000624354 PRSS58Q8IYP2 241 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 ZSCAN4Q8NAM6 433 aaPredicted RBP7.71□□□□□ -1.17
VCL-207ENST00000624354 KCNK17Q96T54 332 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 PBOV1Q9GZY1 135 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 PRDM13Q9H4Q3 707 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 RGCCQ9H4X1 137 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 CA14Q9ULX7 337 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 WIF1Q9Y5W5 379 aa7.71□□□□□ -1.17
VCL-207ENST00000624354 IGKV1D-43A0A0B4J1Z2 117 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 TMEM14DPA8MWL7 114 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 TSTD3H0UI37 97 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 FBXO24O75426 580 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 CD5P06127 495 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 DAOP14920 347 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 HIST1H1BP16401 226 aaKnown RBP7.71□□□□□ -1.18
VCL-207ENST00000624354 ZNF20P17024 532 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 ZP4Q12836 540 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 RAB30Q15771 203 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 ACTBL2Q562R1 376 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 NSUN5P2Q63ZY6 315 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 CA5BP1Q8WTZ4 195 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 MALSU1Q96EH3 234 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 RRNAD1Q96FB5 475 aaKnown RBP7.71□□□□□ -1.18
VCL-207ENST00000624354 C5orf34Q96MH7 638 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 CHST5Q9GZS9 411 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 CYTL1Q9NRR1 136 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 GPR27Q9NS67 375 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 PARPBPQ9NWS1 579 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 MED29Q9NX70 200 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 FBLN5Q9UBX5 448 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 MMP17Q9ULZ9 603 aa7.71□□□□□ -1.18
VCL-207ENST00000624354 H0YIZ8 118 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 MPIG6BO95866 241 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 GSTP1P09211 210 aaKnown RBP7.7□□□□□ -1.18
VCL-207ENST00000624354 CLDN6P56747 220 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 HSF1Q00613 529 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 TLE3Q04726 772 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 SLC9A3R2Q15599 337 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 LBHQ53QV2 105 aaPredicted RBP7.7□□□□□ -1.18
VCL-207ENST00000624354 PRSS54Q6PEW0 395 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 DPPA2Q7Z7J5 298 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 OR1N1Q8NGS0 311 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 MVB12AQ96EY5 273 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 SCGB3A2Q96PL1 93 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 NEU1Q99519 415 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 C2orf88Q9BSF0 95 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 NICN1Q9BSH3 213 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 RAB18Q9NP72 206 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 OR2S2Q9NQN1 319 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 GPR132Q9UNW8 380 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 MTCH2Q9Y6C9 303 aa7.7□□□□□ -1.18
VCL-207ENST00000624354 KIF26BQ2KJY2 2108 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms