RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LPAR6P43657 344 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 DAP3P51398 398 aaKnown RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FOXL2P58012 376 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RPS18P62269 152 aaKnown RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 PJVKQ0ZLH3 352 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 HABP2Q14520 560 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 DHRS7BQ6IAN0 325 aaPredicted RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 ADGRE4PQ86SQ3 457 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 LILRB2Q8N423 598 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SUMF1Q8NBK3 374 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 TCTEX1D2Q8WW35 142 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FRZBQ92765 325 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 CTHRC1Q96CG8 243 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RAB3CQ96E17 227 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 OR8B4Q96RC9 309 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RNF126Q9BV68 326 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 PISDQ9UG56 409 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 EFCAB7A8K855 629 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 K7EPK0 472 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 NME2P1O60361 137 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SCRG1O75711 98 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SLC34A2O95436 690 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 CD1AP06126 327 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 CX3CR1P49238 355 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 DMWDQ09019 674 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 UQCC3Q6UW78 93 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 DCXRQ7Z4W1 244 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SLC25A42Q86VD7 318 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 ANGPTL5Q86XS5 388 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FAM71E2Q8N5Q1 922 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 MITD1Q8WV92 249 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 MRGPRFQ96AM1 343 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 TM4SF19Q96DZ7 209 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 OR5B12Q96R08 314 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SSX3Q99909 188 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 C1orf198Q9H425 327 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 TRANK1O15050 2925 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 A6NIZ1 184 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 UTS2O95399 124 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF44P15621 663 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 GLRA1P23415 457 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 S100PP25815 95 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 CSNK1A1P48729 337 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FHITP49789 147 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 BIDP55957 195 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RAB38P57729 211 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 TAS2R31P59538 309 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RAP1BP61224 184 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RAP1AP62834 184 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 RPL19P84098 196 aaKnown RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF345Q14585 488 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 PDZD11Q5EBL8 140 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 OR2A2Q6IF42 318 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 DHRS11Q6UWP2 260 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FBXW12Q6X9E4 464 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 TMEM104Q8NE00 496 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 FAM213BQ8TBF2 198 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 NT5CQ8TCD5 201 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 PIGCQ92535 297 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 SDSLQ96GA7 329 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 OR10C1Q96KK4 312 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 IER2Q9BTL4 223 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 LRRC61Q9BV99 259 aa6.2□□□□□ -1.42
NEDD9-216ENST00000620854 MRPL22Q9NWU5 206 aaKnown RBP6.2□□□□□ -1.42
NEDD9-216ENST00000620854 CACNA1GO43497 2377 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 A0A1W2PPH5 198 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 WIPF3A6NGB9 483 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 RAB27BO00194 218 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 C1QL1O75973 258 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 NXPH3O95157 252 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 F10P00742 488 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 CD74P04233 296 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 SLC25A4P12235 298 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ASCL1P50553 236 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 RPS4XP62701 263 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 IAH1Q2TAA2 248 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 DRAM2Q6UX65 266 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF813Q6ZN06 617 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 DNM1P46Q6ZS02 220 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 OR8U1Q8NH10 309 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 PIGTQ969N2 578 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 PHYHIPLQ96FC7 376 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF845Q96IR2 970 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 OR6C1Q96RD1 312 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 FN3KRPQ9HA64 309 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 TAF9BQ9HBM6 251 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 LYRM4Q9HD34 91 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 GDF2Q9UK05 429 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 PTRH2Q9Y3E5 179 aaKnown RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 URGCP-MRPS24S4R325 110 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 TMED7-TICAM2A0A0A6YYA0 188 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 COLCA2A8K830 154 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF354AO60765 605 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 CD79AP11912 226 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 FCGR2AP12318 317 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 ZNF93P35789 620 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-216ENST00000620854 CAPZBP47756 277 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 RAB4BP61018 213 aa6.19□□□□□ -1.42
NEDD9-216ENST00000620854 INSM1Q01101 510 aaPredicted RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms