RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 LIPT2A6NK58 231 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 FOXI3A8MTJ6 420 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 LINC00587B1AMM8 73 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 GAPDHP04406 335 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 LANCL3Q6ZV70 420 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 NAA11Q9BSU3 229 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 VN1R1Q9GZP7 353 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 PISDQ9UG56 409 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 SUSD2Q9UGT4 822 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 VCANP13611 3396 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 IGKV1-9A0A0C4DH69 117 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 SHISA8B8ZZ34 492 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 S100A8P05109 93 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 FBLP22087 321 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 PPT1P50897 306 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF84P51523 738 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 FOXF1Q12946 379 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 IAH1Q2TAA2 248 aaPredicted RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 PNLDC1Q8NA58 520 aaKnown RBP17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 DDIT4LQ96D03 193 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 GPER1Q99527 375 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 POLR1DQ9Y2S0 133 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 MYO9BQ13459 2157 aa17.25■□□□□ 0.35
PDLIM3-212ENST00000620787 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 K7EPK0 472 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 SGCEO43556 437 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 CBR1P16152 277 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 CCL1P22362 96 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 FCGR2CP31995 323 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM189A2Q15884 450 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 EIF2S3LQ2VIR3 472 aaKnown RBP17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 RNF212Q495C1 297 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM71E2Q8N5Q1 922 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 OR51T1Q8NGJ9 327 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 ALKBH4Q9NXW9 302 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 AMDHD2Q9Y303 409 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 SZT2Q5T011 3432 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 A0A1W2PNV4 684 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 H3BML4 177 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 KNG1P01042 644 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 HPNP05981 417 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 GIMD1P0DJR0 217 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 CDAP32320 146 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 THBS4P35443 961 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 FBXW4P57775 412 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 HYAL1Q12794 435 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 SMCO1Q147U7 214 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 SURF2Q15527 256 aaPredicted RBP17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 THEM4Q5T1C6 240 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 CRIP3Q6Q6R5 217 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 OR2AJ1Q8NGZ0 328 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 RPS10P5Q9NQ39 176 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 C1orf123Q9NWV4 160 aa17.24■□□□□ 0.35
PDLIM3-212ENST00000620787 A0A1W2PPC4 97 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 DEDDO75618 318 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 JTBO76095 146 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 IFNA2P01563 188 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 AGAP20933 346 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 ACY1Q03154 408 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 MFAP5Q13361 173 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 DMRTC1Q5HYR2 192 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 C1QL2Q7Z5L3 287 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 LURAP1LQ8IV03 231 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 OR1L3Q8NH93 324 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 LMX1AQ8TE12 382 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 STARD10Q9Y365 291 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 RANBP2P49792 3224 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 ARID1AO14497 2285 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 A0A1W2PPE3 182 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 FABP1P07148 127 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 FOSL2P15408 326 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 RBMXP38159 391 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 TMEM33P57088 247 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 FAM3AP98173 230 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 HMGN3Q15651 99 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 OPN5Q6U736 354 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 GKN2Q86XP6 184 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF251Q9BRH9 671 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 PECRQ9BY49 303 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 SEBOXQ9HB31 216 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 PNRC2Q9NPJ4 139 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 TUBD1Q9UJT1 453 aa17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 C14orf166Q9Y224 244 aaKnown RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 RPH3AQ9Y2J0 694 aaPredicted RBP17.23■□□□□ 0.35
PDLIM3-212ENST00000620787 EFNA2O43921 213 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 MT-ND4LP03901 98 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 CLRN1P58418 232 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 RNF4P78317 190 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 C17orf67Q0P5P2 114 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 NOXO1Q8NFA2 376 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 OR5D18Q8NGL1 313 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 PRRX2Q99811 253 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 SCRT1Q9BWW7 348 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 SMIM3Q9BZL3 60 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 IGLV3-19P01714 112 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 ZNF806P0C7X5 589 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 PGA4P0DJD7 388 aa17.22■□□□□ 0.35
PDLIM3-212ENST00000620787 PGA3P0DJD8 388 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms