RNA–Protein interactions for RNA: ENST00000613444.4

USP39-220, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-220ENST00000613444 MARS2Q96GW9 593 aaKnown RBP12.25□□□□□ -0.45
USP39-220ENST00000613444 EXTL2Q9UBQ6 330 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 KCNN3Q9UGI6 736 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 HCFC1P51610 2035 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 IGKV1-27A0A075B6S5 117 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 TMEM272A0A1B0GTI8 110 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 GGT3PA6NGU5 568 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 VGLL3A8MV65 326 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 FAM25AB3EWG3 89 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 FAM25CB3EWG5 89 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 FAM25GB3EWG6 89 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 M0R1B8 84 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 OR3A4PP47883 348 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 FAM131AQ6UXB0 335 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 CSNK2A3Q8NEV1 391 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 PIGCQ92535 297 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 FGF23Q9GZV9 251 aaPredicted RBP12.25□□□□□ -0.45
USP39-220ENST00000613444 PALMDQ9NP74 551 aa12.25□□□□□ -0.45
USP39-220ENST00000613444 ZNF850A8MQ14 1090 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 ARSBP15848 533 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 RAD52P43351 418 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 UQCRFS1P47985 274 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 ANGPTL5Q86XS5 388 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 DTX3Q8N9I9 347 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 GALNT11Q8NCW6 608 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 SYNPRQ8TBG9 265 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 CMBLQ96DG6 245 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 BBC3Q96PG8 261 aaPredicted RBP12.24□□□□□ -0.45
USP39-220ENST00000613444 RHBDL2Q9NX52 303 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 GPR160Q9UJ42 338 aa12.24□□□□□ -0.45
USP39-220ENST00000613444 MAGEB3O15480 346 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 NAT2P11245 290 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 RAC2P15153 192 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 PTBP1P26599 531 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP39-220ENST00000613444 MPV17P39210 176 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 ZP1P60852 638 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
USP39-220ENST00000613444 ALKBH2Q6NS38 261 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 XKRXQ6PP77 449 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
USP39-220ENST00000613444 HPSE2Q8WWQ2 592 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 HAVCR1Q96D42 359 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 TECTBQ96PL2 329 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 COQ3Q9NZJ6 369 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 A0A0G2JMP0 313 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 A0A0X1KG70 313 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 PRKACBP22694 351 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 GNLYP22749 145 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 TUBG1P23258 451 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 ALDH3B1P43353 468 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 MMP15P51511 669 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 ART1P52961 327 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 NKX6-1P78426 367 aaPredicted RBP12.23□□□□□ -0.45
USP39-220ENST00000613444 TLE1Q04724 770 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 PSG7Q13046 419 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 PRDX4Q13162 271 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 UNC119Q13432 240 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 ALKBH6Q3KRA9 238 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 OR10K2Q6IF99 312 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 MOB3CQ70IA8 216 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 C1QL2Q7Z5L3 287 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 BHLHE23Q8NDY6 225 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 RFT1Q96AA3 541 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 PAPOLGQ9BWT3 736 aaKnown RBP12.23□□□□□ -0.45
USP39-220ENST00000613444 BCL2L14Q9BZR8 327 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 TUBG2Q9NRH3 451 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 FBLN5Q9UBX5 448 aa12.23□□□□□ -0.45
USP39-220ENST00000613444 SPTBN1Q01082 2364 aaKnown RBP12.22□□□□□ -0.45
USP39-220ENST00000613444 A0A1B0GUH1 482 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 UPK1BO75841 260 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 BPNT1O95861 308 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 VSIG8P0DPA2 414 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 CD40P25942 277 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 PTGFRP43088 359 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 MSMPQ1L6U9 139 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 PLCXD3Q63HM9 321 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 RAB40AQ8WXH6 277 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 PTX4Q96A99 478 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 WFIKKN1Q96NZ8 548 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 ABHD1Q96SE0 405 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
USP39-220ENST00000613444 ERRFI1Q9UJM3 462 aaPredicted RBP12.22□□□□□ -0.45
USP39-220ENST00000613444 MRPS28Q9Y2Q9 187 aaKnown RBP12.22□□□□□ -0.45
USP39-220ENST00000613444 IQCF6A8MYZ5 107 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 OCMP0CE72 109 aaPredicted RBP12.22□□□□□ -0.45
USP39-220ENST00000613444 TALDO1P37837 337 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 FUT6P51993 359 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 MTCP1P56278 107 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 IL18Q14116 193 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 BAK1Q16611 211 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 AWAT2Q6E213 333 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 C16orf87Q6PH81 154 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 GLIPR1L1Q6UWM5 242 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 UNQ6126/PRO20091Q6UXV3 157 aa12.22□□□□□ -0.45
USP39-220ENST00000613444 SSX8Q7RTT4 187 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms