RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-215	ENST00000612795	PYCR1	P32322	319 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GABRA2	P47869	451 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	FAM3A	P98173	230 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SEC23B	Q15437	767 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MKX	Q8IYA7	352 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CYB561A3	Q8NBI2	242 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR10Z1	Q8NGY1	313 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ANGPTL6	Q8NI99	470 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	REEP6	Q96HR9	211 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	B9D2	Q9BPU9	175 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SIKE1	Q9BRV8	207 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	RTL8A	Q9BWD3	113 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CDCA4	Q9BXL8	241 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ABCB10	Q9NRK6	738 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MRGBP	Q9NV56	204 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TCF19	Q9Y242	345 aa		13.92	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ZNF878	C9JN71	531 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	AKR7A2	O43488	359 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ACAA1	P09110	424 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SPARC	P09486	303 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	COX7A1	P24310	79 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	VDAC2	P45880	294 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	MXRA7	P84157	204 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	IL5RA	Q01344	420 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GFOD2	Q3B7J2	385 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	KCTD8	Q6ZWB6	473 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	TMEM219	Q86XT9	240 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	FTMT	Q8N4E7	242 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PIFO	Q8TCI5	191 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	WIPF2	Q8TF74	440 aa	Predicted RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	RPL3L	Q92901	407 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SLAMF6	Q96DU3	332 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	RCC1L	Q96I51	464 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	WNT10A	Q9GZT5	417 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PPP1R3E	Q9H7J1	279 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	HEXA-AS1	Q9H8Q6	139 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	GMPR2	Q9P2T1	348 aa	Known RBP	13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	NLK	Q9UBE8	527 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	AP3M1	Q9Y2T2	418 aa		13.91	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR2AT4	A6NND4	320 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DUS4L	O95620	317 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ALDOB	P05062	364 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PSKH1	P11801	424 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CX3CR1	P49238	355 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CAPZA1	P52907	286 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	KRTAP10-11	P60412	298 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	KLF10	Q13118	480 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	SLC35F1	Q5T1Q4	408 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	ARPIN	Q7Z6K5	226 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	CSNK2A3	Q8NEV1	391 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	OR52J3	Q8NH60	311 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	DPF1	Q92782	380 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	FAM162A	Q96A26	154 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	INTS9	Q9NV88	658 aa	Known RBP	13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	PITPNC1	Q9UKF7	332 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	COMMD3-BMI1	R4GMX3	469 aa		13.9	□□□□□ -0.18
CSNK1E-215	ENST00000612795	hCG_38984	A0A1B0GV85	526 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795		A0A1W2PPH5	198 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	TMEM210	A6NLX4	147 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	RHCE	P18577	417 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	GLRA1	P23415	457 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	CFL1	P23528	166 aa	Known RBP	13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	HSD11B1	P28845	292 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	SPIB	Q01892	262 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	LIPE	Q05469	1076 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	SNCB	Q16143	134 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	TMEM95	Q3KNT9	176 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	LYPD4	Q6UWN0	246 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	ZNRF1	Q8ND25	227 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	OR2T4	Q8NH00	348 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	OR5K1	Q8NHB7	308 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	RPS4Y2	Q8TD47	263 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	C19orf12	Q9NSK7	152 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	CMTM6	Q9NX76	183 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	RHBDD3	Q9Y3P4	386 aa		13.89	□□□□□ -0.19
CSNK1E-215	ENST00000612795	hCG_1809904	A0A1W2PP81	198 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795		A0A1W2PPE2	198 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795		A0A1W2PR64	198 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795		A0A1W2PRV1	198 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	VGLL3	A8MV65	326 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	IDH3B	O43837	385 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	DIRAS1	O95057	198 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	CLIC3	O95833	236 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	HOXD3	P31249	432 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	SLC15A1	P46059	708 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	GSK3A	P49840	483 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	ENTPD1	P49961	510 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	RAB13	P51153	203 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	GRB2	P62993	217 aa	Known RBP	13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	KRT72	Q14CN4	511 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	LHFPL4	Q7Z7J7	247 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	OR5AU1	Q8NGC0	362 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	OR51L1	Q8NGJ5	315 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	SGK3	Q96BR1	496 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	SP140L	Q9H930	580 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795	NDUFAF4	Q9P032	175 aa		13.88	□□□□□ -0.19
CSNK1E-215	ENST00000612795		A6NDX4	124 aa		13.87	□□□□□ -0.19
CSNK1E-215	ENST00000612795	EDF1	O60869	148 aa	Known RBP	13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms