RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 GLYATL2Q8WU03 294 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 ZDHHC12Q96GR4 267 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 METTL7AQ9H8H3 244 aa18.01■□□□□ 0.47
SSBP3-216ENST00000610401 FER1L5A0AVI2 2057 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 TRBV11-1A0A0K0K1C0 115 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 hCG_1809904A0A1W2PP81 198 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 A0A1W2PR64 198 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 A0A1W2PRV1 198 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 NUDT21O43809 227 aaKnown RBP18■□□□□ 0.47
SSBP3-216ENST00000610401 SFT2D2O95562 160 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 PRH1P02810 166 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 P2RY4P51582 365 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 C5orf24Q7Z6I8 188 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 OR10G3Q8NGC4 313 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 PGAM5Q96HS1 289 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF2Q9BSG1 426 aaPredicted RBP18■□□□□ 0.47
SSBP3-216ENST00000610401 TWSG1Q9GZX9 223 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 ATPIF1Q9UII2 106 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 TNFSF12-TNFSF13A0A0A6YY99 330 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 TNFSF12O43508 249 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 GDF9O60383 454 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 MRPS21P82921 87 aaKnown RBP18■□□□□ 0.47
SSBP3-216ENST00000610401 STT3BQ8TCJ2 826 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 TMEM234Q8WY98 164 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 MMP26Q9NRE1 261 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 PLA2G2EQ9NZK7 142 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 PPP4R1LQ9P1A2 415 aa18■□□□□ 0.47
SSBP3-216ENST00000610401 TRBV23-1A0A0A0MS06 115 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 IGKV1-9A0A0C4DH69 117 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 A6NLC8 198 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 GABREP78334 506 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 ADAM5Q6NVV9 412 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 UEVLDQ8IX04 471 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 SLC30A7Q8NEW0 376 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 OR2AE1Q8NHA4 323 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 SLC39A7Q92504 469 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FBXL17Q9UF56 701 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 IGKV3D-11A0A0A0MRZ8 115 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 OR5H15A6NDH6 313 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 SPRY1O43609 319 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 ISG15P05161 165 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 CD38P28907 300 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FCGR2CP31995 323 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 RBMXP38159 391 aaKnown RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 MEOX2P50222 304 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 GPR85P60893 370 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 SMCO1Q147U7 214 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 TOMM20Q15388 145 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 NECAB3Q96P71 396 aaPredicted RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 OR10A2Q9H208 303 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FBRSQ9HAH7 460 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 SLC2A8Q9NY64 477 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 RCC2Q9P258 522 aaKnown RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 NXT1Q9UKK6 140 aaKnown RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FBXO7Q9Y3I1 522 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 LOC390937A0A1W2PQ73 354 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 TMEM14DPA8MWL7 114 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 K7EPK0 472 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FGF16O43320 207 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 OR13C7P0DN81 318 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 TAF9Q16594 264 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 GKN2Q86XP6 184 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 FAM71E2Q8N5Q1 922 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 ERGIC1Q969X5 290 aa17.99■□□□□ 0.47
SSBP3-216ENST00000610401 MRPL24Q96A35 216 aaKnown RBP17.99■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF407Q9C0G0 2248 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 A6NIZ1 184 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 HSPB2A8KAH6 182 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 PATE4P0C8F1 98 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 CD79AP11912 226 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 ZNF41P51814 821 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 RAP1BP61224 184 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 RAP1AP62834 184 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 HSD11B2P80365 405 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 HSPB2Q16082 182 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 AADACL3Q5VUY0 350 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 UQCC3Q6UW78 93 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 LYPD6Q86Y78 171 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 SUMF1Q8NBK3 374 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 TSTD1Q8NFU3 115 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 AHCTF1Q8WYP5 2266 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 DOCK7Q96N67 2140 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 TRAV20A0A0B4J274 112 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 FAM230AA0A1W2PPH8 454 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 DHRS7CA6NNS2 312 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 ATXN7O15265 892 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 TPPPO94811 219 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 OMGP23515 440 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 RPL12P30050 165 aaKnown RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 KISS1Q15726 138 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 PRSS54Q6PEW0 395 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 FBXO46Q6PJ61 603 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 APCDD1LQ8NCL9 501 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 KCNG3Q8TAE7 436 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 SLC25A43Q8WUT9 341 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 AKIRIN1Q9H9L7 192 aaPredicted RBP17.98■□□□□ 0.47
SSBP3-216ENST00000610401 PLEKHJ1Q9NW61 149 aa17.98■□□□□ 0.47
SSBP3-216ENST00000610401 OR2J2O76002 312 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms