RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 PRAF2O60831 178 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 DHRS3O75911 302 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 RAG2P55895 527 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 GFRA1P56159 465 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 SCAND1P57086 179 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 OR2AK2Q8NG84 335 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 MARCH1Q8TCQ1 289 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 ZPBPQ9BS86 351 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 GON7Q9BXV9 100 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 MOB1AQ9H8S9 216 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 SLC17A5Q9NRA2 495 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 ZNF587BE7ETH6 402 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 ZNF735P0CB33 412 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 MGMTP16455 207 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 PTGFRP43088 359 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 KCNMB1Q16558 191 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 TAF9Q16594 264 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 FAM27BQ5VT28 67 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 H3F3CQ6NXT2 135 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 OR1F12Q8NHA8 337 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 KCNE4Q8WWG9 221 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 LDAHQ9H6V9 325 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 GPR35Q9HC97 309 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 PARD6AQ9NPB6 346 aa13.88□□□□□ -0.19
CTSA-214ENST00000606788 ZNF629Q9UEG4 869 aaPredicted RBP13.88□□□□□ -0.19
CTSA-214ENST00000606788 TMEM14DPA8MWL7 114 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 ERCC1P07992 297 aaPredicted RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 CD79AP11912 226 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 CXCL2P19875 107 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 MEOX1P50221 254 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 CCL11P51671 97 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 MRPS34P82930 218 aaKnown RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 ARF1P84077 181 aaKnown RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 PABPC1L2AQ5JQF8 200 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 PIGCQ92535 297 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 FAM173AQ9BQD7 235 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 CST11Q9H112 138 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 RABL2AQ9UBK7 228 aaPredicted RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 RABL2BQ9UNT1 228 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 KIAA1549Q9HCM3 1950 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 COL27A1Q8IZC6 1860 aaPredicted RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 NR2C1P13056 603 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 ZNF92Q03936 586 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 CPEB3Q8NE35 698 aaKnown RBP13.87□□□□□ -0.19
CTSA-214ENST00000606788 OR4K15Q8NH41 348 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 UQCC2Q9BRT2 126 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 ROS1P08922 2347 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 DHRS2Q13268 280 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 PGAP1Q75T13 922 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 TMEM229BQ8NBD8 167 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 ST8SIA4Q92187 359 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 OR10A2Q9H208 303 aa13.87□□□□□ -0.19
CTSA-214ENST00000606788 APC2O95996 2303 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 SHANK1Q9Y566 2161 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 ZNF503-AS2A6NEH8 195 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 TTLL8A6PVC2 850 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 PER3P56645 1201 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 PPIAP62937 165 aaKnown RBP13.86□□□□□ -0.19
CTSA-214ENST00000606788 ARG2P78540 354 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 MICBQ29980 383 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 CRIP3Q6Q6R5 217 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 LIX1LQ8IVB5 337 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 ZNF680Q8NEM1 530 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 KCNG3Q8TAE7 436 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 MRGPRFQ96AM1 343 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 PDCD10Q9BUL8 212 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 WNT5BQ9H1J7 359 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 SYNGR3O43761 229 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 LHX2P50458 406 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 RRADP55042 308 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 PPP1R1AQ13522 171 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 HLXQ14774 488 aaPredicted RBP13.86□□□□□ -0.19
CTSA-214ENST00000606788 RNFT1Q5M7Z0 435 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 ZNF529Q6P280 563 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 STEAP2Q8NFT2 490 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 SEMA6DQ8NFY4 1073 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 C1QTNF6Q9BXI9 259 aa13.86□□□□□ -0.19
CTSA-214ENST00000606788 PCNX1Q96RV3 2341 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 IGKV1-27A0A075B6S5 117 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 ZNF806P0C7X5 589 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 OPRM1P35372 400 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 NDUFA5Q16718 116 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 RAB12Q6IQ22 244 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 GCNT2Q8N0V5 402 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 ARMC10Q8N2F6 343 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 TMPRSS13Q9BYE2 586 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 F5H5P2 479 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 L7N2F9 121 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 TMEM127O75204 238 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 GLI4P10075 376 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 HIST1H1DP16402 221 aaKnown RBP13.85□□□□□ -0.19
CTSA-214ENST00000606788 CFPP27918 469 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 ZNF528Q3MIS6 628 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 TEX261Q6UWH6 196 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 C12orf45Q8N5I9 185 aaPredicted RBP13.85□□□□□ -0.19
CTSA-214ENST00000606788 CPNE4Q96A23 557 aaPredicted RBP13.85□□□□□ -0.19
CTSA-214ENST00000606788 OR2H1Q9GZK4 316 aa13.85□□□□□ -0.19
CTSA-214ENST00000606788 CRIM1Q9NZV1 1036 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms