RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 FAHP16930 419 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 USF1P22415 310 aaPredicted RBP11.72□□□□□ -0.53
RNF40-212ENST00000602784 GPR6P46095 362 aaPredicted RBP11.72□□□□□ -0.53
RNF40-212ENST00000602784 CDH15P55291 814 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 CEACAM21Q3KPI0 293 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 FAM76BQ5HYJ3 339 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 CLVS2Q5SYC1 327 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 ZDHHC23Q8IYP9 409 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 NANOGP1Q8N7R0 232 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 OR5AK2Q8NH90 309 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 GATAD2BQ8WXI9 593 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 PIGCQ92535 297 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 RAB1CQ92928 201 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 TIMD4Q96H15 378 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 C18orf12Q96KH6 178 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 HIST1H2AAQ96QV6 131 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 MICU1Q9BPX6 476 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 RTL8AQ9BWD3 113 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 BPESC1Q9GZL8 116 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 TRIM36Q9NQ86 728 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 PAK1IP1Q9NWT1 392 aaPredicted RBP11.72□□□□□ -0.53
RNF40-212ENST00000602784 BLOC1S6Q9UL45 172 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 HHLA2Q9UM44 414 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 CACNG2Q9Y698 323 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 TANC2Q9HCD6 1990 aa11.72□□□□□ -0.53
RNF40-212ENST00000602784 DYSFO75923 2080 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 TRBV2A0A0J9YWF9 115 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 TMEM210A6NLX4 147 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 LRRC30A6NM36 301 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 MYL12BO14950 172 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 PPIHO43447 177 aaKnown RBP11.71□□□□□ -0.53
RNF40-212ENST00000602784 NRASP01111 189 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 WNT4P56705 351 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 TAS2R43P59537 309 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 CDK5R1Q15078 307 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 ODF4Q2M2E3 257 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 PEG10Q86TG7 708 aaKnown RBP11.71□□□□□ -0.53
RNF40-212ENST00000602784 MOGAT3Q86VF5 341 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 RDH10Q8IZV5 341 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.53
RNF40-212ENST00000602784 ZNF676Q8N7Q3 588 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 HPS1Q92902 700 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 YTHDF1Q9BYJ9 559 aaKnown RBP11.71□□□□□ -0.53
RNF40-212ENST00000602784 COMMD4Q9H0A8 199 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 PPP1R3EQ9H7J1 279 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 FN3KRPQ9HA64 309 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 UBAP1Q9NZ09 502 aa11.71□□□□□ -0.53
RNF40-212ENST00000602784 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 RGS10O43665 173 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 SERPINA3P01011 423 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 CFHR2P36980 270 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 PMELP40967 661 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 GTF2A1P52655 376 aaPredicted RBP11.7□□□□□ -0.54
RNF40-212ENST00000602784 GNG3P63215 75 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 BDH1Q02338 343 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 ACSM1Q08AH1 577 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 IRF3Q14653 427 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 MPPED2Q15777 294 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 DMKNQ6E0U4 476 aaPredicted RBP11.7□□□□□ -0.54
RNF40-212ENST00000602784 PRSS48Q7RTY5 328 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 OR1M1Q8NGA1 313 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 OR11L1Q8NGX0 322 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 HPSE2Q8WWQ2 592 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 PP6455Q8WZ26 134 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 DVL3Q92997 716 aaPredicted RBP11.7□□□□□ -0.54
RNF40-212ENST00000602784 SMIM19Q96E16 107 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 RNF170Q96K19 258 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 TECTBQ96PL2 329 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 MND1Q9BWT6 205 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 TLNRD1Q9H1K6 362 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 PLEKHA1Q9HB21 404 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 TREM2Q9NZC2 230 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 ERVK-18Q9QC07 812 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 NPTNQ9Y639 398 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 ZANQ9Y493 2812 aa11.7□□□□□ -0.54
RNF40-212ENST00000602784 IGHV4-61A0A0C4DH41 118 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 ANKRD61A6NGH8 418 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 MRPS14O60783 128 aaKnown RBP11.69□□□□□ -0.54
RNF40-212ENST00000602784 CD1AP06126 327 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 GRPP07492 148 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 INHBBP09529 407 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 CHN2P52757 468 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 ZNF154Q13106 437 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 PRAMEF6Q5VXH4 476 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 XAF1Q6GPH4 301 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 UTS2BQ765I0 119 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 WDR86Q86TI4 376 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 C11orf53Q8IXP5 236 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 SGCDQ92629 289 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 PDCD1LG2Q9BQ51 273 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 CHST5Q9GZS9 411 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 UFSP2Q9NUQ7 469 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 RNF7Q9UBF6 113 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 SIRT4Q9Y6E7 314 aaPredicted RBP11.69□□□□□ -0.54
RNF40-212ENST00000602784 MED13LQ71F56 2210 aa11.69□□□□□ -0.54
RNF40-212ENST00000602784 IGHV3-64DA0A0J9YX35 117 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms