RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 ZNF418Q8TF45 676 aaPredicted RBP11.61□□□□□ -0.55
IRF3-225ENST00000600022 PHYHIPQ92561 330 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 NIPAL2Q9H841 368 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 CENPMQ9NSP4 180 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 SLCO1C1Q9NYB5 712 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 CYB5R1Q9UHQ9 305 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 ZNF281Q9Y2X9 895 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 SF3B6Q9Y3B4 125 aaKnown RBP11.61□□□□□ -0.55
IRF3-225ENST00000600022 WNK2Q9Y3S1 2297 aa11.61□□□□□ -0.55
IRF3-225ENST00000600022 IGLV3-9A0A075B6K5 115 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 TRAV20A0A0B4J274 112 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 TMEM212A6NML5 194 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 ZNF879B4DU55 563 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 ZNF878C9JN71 531 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 E9PI62 339 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 MAGEB4O15481 346 aaPredicted RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 GATBO75879 557 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 FARS2O95363 451 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 ABHD16AO95870 558 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 ZNF250P15622 560 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 HSD11B1P28845 292 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 RPS27P42677 84 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 RORCP51449 518 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 PCBD1P61457 104 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 MRPS11P82912 194 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 ENDOGQ14249 297 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 FAM27BQ5VT28 67 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 OTPQ5XKR4 325 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 RGS7BPQ6MZT1 257 aaPredicted RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 LINC00299Q6ZSB3 139 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 RHOUQ7L0Q8 258 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 CPEB3Q8NE35 698 aaKnown RBP11.6□□□□□ -0.55
IRF3-225ENST00000600022 GJC3Q8NFK1 279 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 MCFD2Q8NI22 146 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 ABHD4Q8TB40 342 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 SYNPRQ8TBG9 265 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 AP3S1Q92572 193 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 TAF15Q92804 592 aaKnown RBP eCLIP11.6□□□□□ -0.552e-8■■□□□ 13.9
IRF3-225ENST00000600022 SLAMF6Q96DU3 332 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 EMC7Q9NPA0 242 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 OPN4Q9UHM6 478 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 GTF2A1LQ9UNN4 478 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 LHFPL6Q9Y693 200 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 A3GALT2U3KPV4 340 aa11.6□□□□□ -0.55
IRF3-225ENST00000600022 LOC110117498-PIK3R3F6TDL0 507 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 CDRT1O95170 752 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 APOC1P02654 83 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 DCTDP32321 178 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 S100A5P33763 92 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 CCR9P51686 369 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 UCP2P55851 309 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 RPS23P62266 143 aaKnown RBP11.59□□□□□ -0.55
IRF3-225ENST00000600022 GRB2P62993 217 aaKnown RBP11.59□□□□□ -0.55
IRF3-225ENST00000600022 ZNF404Q494X3 552 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 ACSM3Q53FZ2 586 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 FDX2Q6P4F2 183 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 SPATC1Q76KD6 591 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 CEACAM19Q7Z692 300 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 CROCCP3Q8IVE0 287 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 LRRC18Q8N456 261 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 RNF133Q8WVZ7 376 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 AMELYQ99218 206 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 WACQ9BTA9 647 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 ZNF416Q9BWM5 594 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 SLITRK2Q9H156 845 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 MMP27Q9H306 513 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 RNF121Q9H920 327 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 SNTG1Q9NSN8 517 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 ASH2LQ9UBL3 628 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 WIPI2Q9Y4P8 454 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 LRP12Q9Y561 859 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 R4GMQ9 66 aa11.59□□□□□ -0.55
IRF3-225ENST00000600022 IGHV1-69-2A0A0G2JMI3 117 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 IGHV2-5P01817 119 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 CST2P09228 141 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 MTNR1BP49286 362 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 KLF3P57682 345 aaPredicted RBP11.58□□□□□ -0.56
IRF3-225ENST00000600022 HIST1H3AP68431 136 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 SCRN3Q0VDG4 424 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 AWAT1Q58HT5 328 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 SPATA46Q5T0L3 261 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 BCL2L15Q5TBC7 163 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 HIST2H3PS2Q5TEC6 136 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 CORO6Q6QEF8 472 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 CFAP77Q6ZQR2 320 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 HIST2H3AQ71DI3 136 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 C1QL2Q7Z5L3 287 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 TPRA1Q86W33 373 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 S100ZQ8WXG8 99 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 MAP6Q96JE9 813 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 DUX5Q96PT3 197 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 RNF167Q9H6Y7 350 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 MOB1AQ9H8S9 216 aa11.58□□□□□ -0.56
IRF3-225ENST00000600022 SIRT4Q9Y6E7 314 aaPredicted RBP11.58□□□□□ -0.56
IRF3-225ENST00000600022 TRIM77I1YAP6 450 aa11.57□□□□□ -0.56
IRF3-225ENST00000600022 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
IRF3-225ENST00000600022 CFL1P23528 166 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms