RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 SEH1LQ96EE3 360 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 TSSK6Q9BXA6 273 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 PPA2Q9H2U2 334 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 SLC25A10Q9UBX3 287 aaPredicted RBP17.32■□□□□ 0.36
PNKP-212ENST00000599454 RHBDD3Q9Y3P4 386 aa17.32■□□□□ 0.36
PNKP-212ENST00000599454 CAV3P56539 151 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 ZNF121P58317 390 aaPredicted RBP17.31■□□□□ 0.36
PNKP-212ENST00000599454 KLRD1Q13241 179 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 BLMHQ13867 455 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 KLHL12Q53G59 568 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 ZNF770Q6IQ21 691 aaPredicted RBP17.31■□□□□ 0.36
PNKP-212ENST00000599454 PGAM4Q8N0Y7 254 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 OR2T33Q8NG76 320 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 OR5T2Q8NGG2 359 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 ABHD6Q9BV23 337 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 FAM234AQ9H0X4 552 aa17.31■□□□□ 0.36
PNKP-212ENST00000599454 A0A1W2PRD5 423 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 A0A1W2PRF3 423 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 A0A1W2PRM7 423 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 CCNB2O95067 398 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 GASTP01350 101 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 SELLP14151 372 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 ZNF3P17036 446 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 PRB3Q04118 309 aaPredicted RBP17.3■□□□□ 0.36
PNKP-212ENST00000599454 SPATS1Q496A3 300 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 LINC01590Q5TEZ4 76 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 SHFQ7M4L6 423 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 OR6N2Q8NGY6 317 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 OR4Q3Q8NH05 313 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 PGAM5Q96HS1 289 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 INTS14Q96SY0 518 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 ZNF391Q9UJN7 358 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 ZNF281Q9Y2X9 895 aa17.3■□□□□ 0.36
PNKP-212ENST00000599454 SF3B6Q9Y3B4 125 aaKnown RBP17.3■□□□□ 0.36
PNKP-212ENST00000599454 A0A1W2PQ09 198 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 RIIAD1A6NNX1 92 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 SIGLEC5O15389 551 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 CST4P01036 141 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 OPN1MWP04001 364 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 OPN1MW2P0DN77 364 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 OPN1MW3P0DN78 364 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 CLUP10909 449 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 MSX2P35548 267 aaPredicted RBP17.29■□□□□ 0.36
PNKP-212ENST00000599454 KIR2DS4P43632 304 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 DLX1P56177 255 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 MXRA7P84157 204 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 DGUOKQ16854 277 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 BEAN1Q3B7T3 259 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 HSP90B2PQ58FF3 399 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 FAM76BQ5HYJ3 339 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 KPRPQ5T749 579 aaPredicted RBP17.29■□□□□ 0.36
PNKP-212ENST00000599454 CPLX4Q7Z7G2 160 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 DTX3Q8N9I9 347 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 AQP11Q8NBQ7 271 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 PAPD5Q8NDF8 572 aaKnown RBP17.29■□□□□ 0.36
PNKP-212ENST00000599454 OR5D13Q8NGL4 314 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 ANGPTL6Q8NI99 470 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 OR5P3Q8WZ94 311 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 GAFA1Q96PS6 74 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 WDR13Q9H1Z4 485 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 RANBP3Q9H6Z4 567 aaPredicted RBP17.29■□□□□ 0.36
PNKP-212ENST00000599454 PPP1R3EQ9H7J1 279 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 RAB18Q9NP72 206 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 SNTG1Q9NSN8 517 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 DNAJC27Q9NZQ0 273 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 ZNF319Q9P2F9 582 aa17.29■□□□□ 0.36
PNKP-212ENST00000599454 H3BUX3 64 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 ACAA1P09110 424 aaPredicted RBP17.28■□□□□ 0.36
PNKP-212ENST00000599454 NDUFB7P17568 137 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 OPRL1P41146 370 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 EFNB2P52799 333 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 PRDX4Q13162 271 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 AANATQ16613 207 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 GFOD2Q3B7J2 385 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 ERI1Q8IV48 349 aaKnown RBP17.28■□□□□ 0.36
PNKP-212ENST00000599454 PNKDQ8N490 385 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 OR4C13Q8NGP0 309 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 RPL3LQ92901 407 aaKnown RBP17.28■□□□□ 0.36
PNKP-212ENST00000599454 CDRT15Q96T59 188 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 ELAC2Q9BQ52 826 aaKnown RBP17.28■□□□□ 0.36
PNKP-212ENST00000599454 NLKQ9UBE8 527 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 MAB21L2Q9Y586 359 aa17.28■□□□□ 0.36
PNKP-212ENST00000599454 TRBV23-1A0A0A0MS06 115 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 H2BFMP0C1H6 154 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 POU1F1P28069 291 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 GMFBP60983 142 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 REC114Q7Z4M0 266 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 OR51G2Q8NGK0 314 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 CFHR4Q92496 578 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 DUS3LQ96G46 650 aaKnown RBP17.27■□□□□ 0.36
PNKP-212ENST00000599454 SSX3Q99909 188 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 DGCR6LQ9BY27 220 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 BRD7Q9NPI1 651 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 CMC2Q9NRP2 79 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 ARMC1Q9NVT9 282 aa17.27■□□□□ 0.36
PNKP-212ENST00000599454 OR2AT4A6NND4 320 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 ZNF850A8MQ14 1090 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 AKR7A2O43488 359 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 GSTT1P30711 240 aa17.26■□□□□ 0.35
PNKP-212ENST00000599454 MAGEA2P43356 314 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms