RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 OPA3Q9H6K4 179 aa17.14■□□□□ 0.33
IRF3-221ENST00000598808 ZNF469Q96JG9 3925 aaPredicted RBP17.14■□□□□ 0.33
IRF3-221ENST00000598808 F8P00451 2351 aa17.14■□□□□ 0.33
IRF3-221ENST00000598808 PRRC2AP48634 2157 aaKnown RBP17.14■□□□□ 0.33
IRF3-221ENST00000598808 GATBO75879 557 aaKnown RBP17.13■□□□□ 0.33
IRF3-221ENST00000598808 CDRT1O95170 752 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 DAOP14920 347 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 TNFSF4P23510 183 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 MMP15P51511 669 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 PCGF3Q3KNV8 242 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 BCL2L15Q5TBC7 163 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 TPRA1Q86W33 373 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 ELMOD3Q96FG2 381 aa17.13■□□□□ 0.33
IRF3-221ENST00000598808 TEP1Q99973 2627 aaKnown RBP17.13■□□□□ 0.33
IRF3-221ENST00000598808 IGHV1-46P01743 117 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 CD40LGP29965 261 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 ETV6P41212 452 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 ZNF45Q02386 682 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 OR10AD1Q8NGE0 317 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 OR56B2PQ8NGI1 322 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 THRSPQ92748 146 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 PGLYRP3Q96LB9 341 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 PBOV1Q9GZY1 135 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 SAP30LQ9HAJ7 183 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 ACOXLQ9NUZ1 547 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 FAM206AQ9NX38 181 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 SIRT4Q9Y6E7 314 aaPredicted RBP17.12■□□□□ 0.33
IRF3-221ENST00000598808 R4GMQ9 66 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 MAP1AP78559 2803 aaPredicted RBP17.12■□□□□ 0.33
IRF3-221ENST00000598808 CD300LBA8K4G0 201 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 IQCF6A8MYZ5 107 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 E9PI62 339 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 CDC14BO60729 498 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 SC5DO75845 299 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 HPXP02790 462 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 TNFAIP6P98066 277 aaPredicted RBP17.12■□□□□ 0.33
IRF3-221ENST00000598808 ODF4Q2M2E3 257 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 PRSS57Q6UWY2 283 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 PRSS45Q7RTY3 260 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 KRTAP1-3Q8IUG1 177 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 OR8G5Q8NG78 346 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 SGK3Q96BR1 496 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 EGLN1Q9GZT9 426 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 C6orf62Q9GZU0 229 aaPredicted RBP17.12■□□□□ 0.33
IRF3-221ENST00000598808 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 ZNF319Q9P2F9 582 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 ZDHHC8Q9ULC8 765 aa17.12■□□□□ 0.33
IRF3-221ENST00000598808 LYNX1G3V0Z9 82 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 LILRA1O75019 489 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 ARL6IP5O75915 188 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 NCR1O76036 304 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 LYNX1P0DP58 116 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 PSMB10P40306 273 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 PDLIM4P50479 330 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 LIPNQ5VXI9 398 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 FDX2Q6P4F2 183 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 TMEM91Q6ZNR0 172 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 MFSD4AQ8N468 514 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 OR13G1Q8NGZ3 307 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 UBASH3BQ8TF42 649 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 FAM168AQ92567 244 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 GHSRQ92847 366 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 REPIN1Q9BWE0 567 aaKnown RBP17.11■□□□□ 0.33
IRF3-221ENST00000598808 RGCCQ9H4X1 137 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 MOB1AQ9H8S9 216 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 TMEM100Q9NV29 134 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 OR52A1Q9UKL2 312 aa17.11■□□□□ 0.33
IRF3-221ENST00000598808 TRBV2A0A0J9YWF9 115 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 TMEM127O75204 238 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 MYL9P24844 172 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 DCTDP32321 178 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 SDC2P34741 201 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 SLC3A1Q07837 685 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 YIF1BQ5BJH7 314 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 C16orf87Q6PH81 154 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 SPNS3Q6ZMD2 512 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 Q6ZR03 302 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 FAM71F1Q96KD3 344 aaPredicted RBP17.1■□□□□ 0.33
IRF3-221ENST00000598808 WDFY2Q96P53 400 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 DIRC2Q96SL1 478 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 SMURF1Q9HCE7 757 aa17.1■□□□□ 0.33
IRF3-221ENST00000598808 TRAV1-2A0A0B4J238 106 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 IGHV3-64DA0A0J9YX35 117 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 hCG_38984A0A1B0GV85 526 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 ACOD1A6NK06 481 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 ANKRD30BLA7E2S9 258 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 PNPP00491 289 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 CSF3P09919 207 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 CA6P23280 308 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 GSK3AP49840 483 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 MMP16P51512 607 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 PPP5CP53041 499 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 FAM3AP98173 230 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 OR8G1Q15617 311 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 FAM209AQ5JX71 171 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 TGIF2LYQ8IUE0 185 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 OR51E1Q8TCB6 317 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 ACOT12Q8WYK0 555 aa17.09■□□□□ 0.33
IRF3-221ENST00000598808 DVL3Q92997 716 aaPredicted RBP17.09■□□□□ 0.33
IRF3-221ENST00000598808 PPP1R14AQ96A00 147 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms