RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 SSX1Q16384 188 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ARMCX4Q5H9R4 360 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 UBE2UQ5VVX9 321 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 TMEM42Q69YG0 159 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 SVOPQ8N4V2 548 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF525Q8N782 197 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF420Q8TAQ5 688 aaPredicted RBP13.13□□□□□ -0.31
SMCO4-206ENST00000596676 TSEN15Q8WW01 171 aaKnown RBP13.13□□□□□ -0.31
SMCO4-206ENST00000596676 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ITPKCQ96DU7 683 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 DECR2Q9NUI1 292 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 UFSP2Q9NUQ7 469 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 ENPP5Q9UJA9 477 aa13.13□□□□□ -0.31
SMCO4-206ENST00000596676 IGKV1-9A0A0C4DH69 117 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 TRBV5-5A0A0J9YX44 114 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 NRASP01111 189 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 RPSAP08865 295 aaKnown RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 DAOP14920 347 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 CPEP16870 476 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 PSMB9P28065 219 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 GNALP38405 381 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 GP2P55259 537 aaKnown RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 CARTPTQ16568 116 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 CLVS2Q5SYC1 327 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 PLCXD3Q63HM9 321 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF826PQ6ZT77 177 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 KRT74Q7RTS7 529 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 MOGAT3Q86VF5 341 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 PHC2Q8IXK0 858 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 ZDHHC23Q8IYP9 409 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 TRMT10AQ8TBZ6 339 aaKnown RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 HAVCR2Q8TDQ0 301 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 GPR148Q8TDV2 347 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 NEU4Q8WWR8 484 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 OR5P3Q8WZ94 311 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 UFD1Q92890 307 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 RNF170Q96K19 258 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 OR14A2Q96R54 314 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 NR1H4Q96RI1 486 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 ISYNA1Q9NPH2 558 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 NKIRAS2Q9NYR9 191 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 CGGBP1Q9UFW8 167 aaPredicted RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 EDARQ9UNE0 448 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 DHDHQ9UQ10 334 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 SF3B6Q9Y3B4 125 aaKnown RBP13.12□□□□□ -0.31
SMCO4-206ENST00000596676 DYSFO75923 2080 aa13.12□□□□□ -0.31
SMCO4-206ENST00000596676 A0A087WXM4 84 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 PIN1P1O15428 100 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF20P17024 532 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 CD200P41217 278 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 GPM6AP51674 278 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 ART1P52961 327 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 PCGF3Q3KNV8 242 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 ZMAT1Q5H9K5 638 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 FAM209AQ5JX71 171 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 FAM27D1Q5T7N8 215 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 C11orf53Q8IXP5 236 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 OR8S1Q8NH09 359 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 DIRC2Q96SL1 478 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 NKX3-1Q99801 234 aaPredicted RBP13.11□□□□□ -0.31
SMCO4-206ENST00000596676 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 PLEKHA1Q9HB21 404 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 TAS2R4Q9NYW5 299 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 IL19Q9UHD0 177 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 MPC1Q9Y5U8 109 aa13.11□□□□□ -0.31
SMCO4-206ENST00000596676 VPS13CQ709C8 3753 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 IGKV1-27A0A075B6S5 117 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 IGHV1-69-2A0A0G2JMI3 117 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 FAM230AA0A1W2PPH8 454 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF732B4DXR9 585 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 RP2O75695 350 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 CD1AP06126 327 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 OCM2P0CE71 109 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 TNFSF4P23510 183 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 FAM201AQ5SY85 155 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 ZBTB37Q5TC79 503 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 RPL3LQ92901 407 aaKnown RBP13.1□□□□□ -0.31
SMCO4-206ENST00000596676 MUL1Q969V5 352 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 SPACA5Q96QH8 159 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 SLC22A4Q9H015 551 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 PPIL3Q9H2H8 161 aaKnown RBP13.1□□□□□ -0.31
SMCO4-206ENST00000596676 METTL17Q9H7H0 456 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-206ENST00000596676 GCM1Q9NP62 436 aa13.1□□□□□ -0.31
SMCO4-206ENST00000596676 FBXO9Q9UK97 447 aaPredicted RBP13.1□□□□□ -0.31
SMCO4-206ENST00000596676 TEX15Q9BXT5 2789 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 TRBV5-7A0A0A0MS05 114 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF879B4DU55 563 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF205O95201 554 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 ERCC1P07992 297 aaPredicted RBP13.09□□□□□ -0.31
SMCO4-206ENST00000596676 ZNF12P17014 697 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 ATF1P18846 271 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 CRYBB2P43320 205 aa13.09□□□□□ -0.31
SMCO4-206ENST00000596676 SRP9P49458 86 aaKnown RBP13.09□□□□□ -0.31
SMCO4-206ENST00000596676 FABP5Q01469 135 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms