RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 METTL17Q9H7H0 456 aaPredicted RBP9.33□□□□□ -0.92
LIG1-211ENST00000596457 ISG20L2Q9H9L3 353 aaKnown RBP9.33□□□□□ -0.92
LIG1-211ENST00000596457 GPR173Q9NS66 373 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ERVK13-1Q9NX77 482 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 RNF7Q9UBF6 113 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 ENPP5Q9UJA9 477 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 MPC1Q9Y5U8 109 aa9.33□□□□□ -0.92
LIG1-211ENST00000596457 HIVEP2P31629 2446 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 PPIAL4EA0A075B759 164 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 A0A1B0GTI1 187 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 A8MV72 311 aaPredicted RBP9.32□□□□□ -0.92
LIG1-211ENST00000596457 PPIAL4DF5H284 164 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 IFNL4K9M1U5 179 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 SYT7O43581 403 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 XPNPEP2O43895 674 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 LMX1BO60663 402 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 CRLF1O75462 422 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 DHRS3O75911 302 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 CST4P01036 141 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 NRASP01111 189 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 IGHA1P01876 353 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 PPIAL4FP0DN26 164 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 ATP6V1B1P15313 513 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 CD80P33681 288 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 THBS2P35442 1172 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 GATA4P43694 442 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 GPM6AP51674 278 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 LMO4P61968 165 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 CSNK2BP67870 215 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 ZMYND11Q15326 602 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 DOK3Q7L591 496 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 KLHL36Q8N4N3 616 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 OR1M1Q8NGA1 313 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 OR5P3Q8WZ94 311 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 TFAP2CQ92754 450 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 GGHQ92820 318 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 RPL3LQ92901 407 aaKnown RBP9.32□□□□□ -0.92
LIG1-211ENST00000596457 ERGIC1Q969X5 290 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 RAB39BQ96DA2 213 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 MYCBPQ99417 103 aaPredicted RBP9.32□□□□□ -0.92
LIG1-211ENST00000596457 PLEKHA1Q9HB21 404 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 KCNS2Q9ULS6 477 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 PPIAL4AQ9Y536 164 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 HSPE1-MOB4S4R3N1 261 aa9.32□□□□□ -0.92
LIG1-211ENST00000596457 IRGMA1A4Y4 181 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 ZNF732B4DXR9 585 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 C3orf80F5H4A9 247 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 CDIPTO14735 213 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 IGHV2-5P01817 119 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 MDH2P40926 338 aaKnown RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 ETV1P50549 477 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 GBX2P52951 348 aaPredicted RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 NANOS3P60323 173 aaKnown RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 ALKBH1Q13686 389 aaKnown RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 IZUMO2Q6UXV1 221 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 IL17RELQ6ZVW7 336 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 WDR86Q86TI4 376 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 LRRC28Q86X40 367 aaPredicted RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 PRIMA1Q86XR5 153 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 SPICQ8N5J4 248 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 ZNF676Q8N7Q3 588 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 OR2G2Q8NGZ5 317 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 Q8TCH9 128 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 NPRL2Q8WTW4 380 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 LRRC29Q8WV35 223 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 ITPKCQ96DU7 683 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 PELI1Q96FA3 418 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 TMEM80Q96HE8 168 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 ABCB9Q9NP78 766 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 FGF20Q9NP95 211 aaPredicted RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 INPP5EQ9NRR6 644 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 MRPS18AQ9NVS2 196 aaKnown RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 CHCHD3Q9NX63 227 aaKnown RBP9.31□□□□□ -0.92
LIG1-211ENST00000596457 FRRS1LQ9P0K9 344 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 V9GYS6 101 aa9.31□□□□□ -0.92
LIG1-211ENST00000596457 IGHV3OR15-7A0A075B7D8 119 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 LOC107986453A0A1B0GWG9 222 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 B4DSR2 109 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 E9PI62 339 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 UBCP0CG48 685 aaKnown RBP9.3□□□□□ -0.92
LIG1-211ENST00000596457 LIMS3P0CW19 117 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 LIMS4P0CW20 117 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 MYL12AP19105 171 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 DCKP27707 260 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 LCN2P80188 198 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 ST3GAL4Q11206 333 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 ZNF154Q13106 437 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 MED21Q13503 144 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 ZNF181Q2M3W8 571 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 CEACAM21Q3KPI0 293 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 CLVS2Q5SYC1 327 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 OR2G6Q5TZ20 316 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 TMPRSS11AQ6ZMR5 421 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 AHSA2Q719I0 299 aa9.3□□□□□ -0.92
LIG1-211ENST00000596457 GLCCI1Q86VQ1 547 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms