RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 SAMHD1Q9Y3Z3 626 aaKnown RBP13.18□□□□□ -0.3
LIM2-202ENST00000596399 ZNF816-ZNF321PA0A0X1KG74 233 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 SLC22A31A6NKX4 558 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 RIIAD1A6NNX1 92 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 NPFFO15130 113 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 IFNGP01579 166 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 PAX6P26367 422 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 NAA10P41227 235 aaPredicted RBP13.17□□□□□ -0.3
LIM2-202ENST00000596399 PRDX4Q13162 271 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 C11orf91Q3C1V1 193 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 C16orf89Q6UX73 402 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 TIGD4Q8IY51 512 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 GALNT4Q8N4A0 578 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 GAFA1Q96PS6 74 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 RAB3IPQ96QF0 476 aaPredicted RBP13.17□□□□□ -0.3
LIM2-202ENST00000596399 DGCR6LQ9BY27 220 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 OR10A2Q9H208 303 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 OR51V1Q9H2C8 321 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 TOR3AQ9H497 397 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 ELL3Q9HB65 397 aaPredicted RBP13.17□□□□□ -0.3
LIM2-202ENST00000596399 CMC2Q9NRP2 79 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 ACTR3BQ9P1U1 418 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 BAIAP2Q9UQB8 552 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 SIGLEC9Q9Y336 463 aa13.17□□□□□ -0.3
LIM2-202ENST00000596399 SELENOFO60613 162 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 TIPRLO75663 272 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 FBP1P09467 338 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 H2BFMP0C1H6 154 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 ZNF3P17036 446 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 SAA4P35542 130 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 MS4A2Q01362 244 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 EGR3Q06889 387 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 LRRC10Q5BKY1 277 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 ATPAF1Q5TC12 328 aaPredicted RBP13.16□□□□□ -0.3
LIM2-202ENST00000596399 DHRS7BQ6IAN0 325 aaPredicted RBP13.16□□□□□ -0.3
LIM2-202ENST00000596399 OR2T5Q6IEZ7 315 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 METAP1DQ6UB28 335 aaPredicted RBP13.16□□□□□ -0.3
LIM2-202ENST00000596399 KCTD8Q6ZWB6 473 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 CMTM4Q8IZR5 234 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 CSNK2A3Q8NEV1 391 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 OR52H1Q8NGJ2 320 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 OR2T29Q8NH02 315 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 HPSE2Q8WWQ2 592 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 OR5P3Q8WZ94 311 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 PIGCQ92535 297 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 C12orf43Q96C57 262 aaKnown RBP13.16□□□□□ -0.3
LIM2-202ENST00000596399 MICU1Q9BPX6 476 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 C16orf95Q9H693 158 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 VPREB3Q9UKI3 123 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 KLHDC2Q9Y2U9 406 aa13.16□□□□□ -0.3
LIM2-202ENST00000596399 MEIOCA2RUB1 952 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 RHBDL1O75783 438 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 GLCEO94923 617 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 NDUFB7P17568 137 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 BLVRAP53004 296 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 HCCSP53701 268 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 SLC35E4Q6ICL7 350 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 ZNF788Q6ZQV5 615 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 OR10G2Q8NGC3 310 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 C8orf46Q8TAG6 207 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 THEM6Q8WUY1 208 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 RORBQ92753 470 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 RNF170Q96K19 258 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 FEVQ99581 238 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 RTL8AQ9BWD3 113 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 PPA2Q9H2U2 334 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 REEP1Q9H902 201 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 SP140LQ9H930 580 aa13.15□□□□□ -0.3
LIM2-202ENST00000596399 SLC25A10Q9UBX3 287 aaPredicted RBP13.15□□□□□ -0.3
LIM2-202ENST00000596399 ANXA2P2A6NMY6 339 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 H3BN98 237 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 TSPAN9O75954 239 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 LYNP07948 512 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 CFL1P23528 166 aaKnown RBP13.14□□□□□ -0.31
LIM2-202ENST00000596399 EEF1B2P24534 225 aaKnown RBP13.14□□□□□ -0.31
LIM2-202ENST00000596399 DCTDP32321 178 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 GPM6AP51674 278 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 IL5RAQ01344 420 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 HCP5Q6MZN7 132 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 PLBD1Q6P4A8 553 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 TMEM179BQ7Z7N9 219 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 BBS1Q8NFJ9 593 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 PPP1R35Q8TAP8 253 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 TEX47Q8TBZ9 253 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 NPRL2Q8WTW4 380 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 LRTOMTQ8WZ04 291 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 DUS3LQ96G46 650 aaKnown RBP13.14□□□□□ -0.31
LIM2-202ENST00000596399 ARL2BPQ9Y2Y0 163 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 CAB39Q9Y376 341 aaPredicted RBP13.14□□□□□ -0.31
LIM2-202ENST00000596399 MPC1Q9Y5U8 109 aa13.14□□□□□ -0.31
LIM2-202ENST00000596399 IGKV1D-17A0A075B6S4 117 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 A0A0G2JK05 382 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 A0A1W2PQ09 198 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 BTBD17A6NE02 478 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 NKX6-3A6NJ46 265 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 B2RBV5 119 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 GPR37O15354 613 aa13.13□□□□□ -0.31
LIM2-202ENST00000596399 PAHP00439 452 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms