RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 WNT2BQ93097 391 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 GPER1Q99527 375 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 EMC6Q9BV81 110 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 ARV1Q9H2C2 271 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 TUBA4BQ9H853 241 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 SDHAF3Q9NRP4 125 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 EHFQ9NZC4 300 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 PCDHGA1Q9Y5H4 931 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 LMO7DNF2Z398 122 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 IFNA2P01563 188 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 S100A8P05109 93 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 CTSDP07339 412 aaPredicted RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 ATXN8OSP0DMR3 200 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 CD38P28907 300 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 RPL12P30050 165 aaKnown RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 SLC16A14Q7RTX9 510 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 COMMD2Q86X83 199 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 KMT5CQ86Y97 462 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 NFAM1Q8NET5 270 aaPredicted RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 OR51T1Q8NGJ9 327 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 SLC25A43Q8WUT9 341 aaPredicted RBP11.67□□□□□ -0.54
VRK3-209ENST00000594948 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 PECRQ9BY49 303 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 PLEKHA2Q9HB19 425 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 DECR2Q9NUI1 292 aa11.67□□□□□ -0.54
VRK3-209ENST00000594948 LAMA2P24043 3122 aaKnown RBP11.66□□□□□ -0.54
VRK3-209ENST00000594948 TRAF3IP2O43734 574 aaPredicted RBP11.66□□□□□ -0.54
VRK3-209ENST00000594948 DEDDO75618 318 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 SMIM6P0DI80 62 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 GLRA1P23415 457 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 NFYBP25208 207 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 CD27P26842 260 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 PTGER4P35408 488 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 PMELP40967 661 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 DHPSP49366 369 aaPredicted RBP11.66□□□□□ -0.54
VRK3-209ENST00000594948 ZNF41P51814 821 aaPredicted RBP11.66□□□□□ -0.54
VRK3-209ENST00000594948 UCP2P55851 309 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 FBXW4P57775 412 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 S100A10P60903 97 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 LANCL3Q6ZV70 420 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 PLXDC1Q8IUK5 500 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 UBAC2Q8NBM4 344 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 C10orf35Q96D05 121 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 CMSS1Q9BQ75 279 aaKnown RBP11.66□□□□□ -0.54
VRK3-209ENST00000594948 SULT4A1Q9BR01 284 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 NKX2-4Q9H2Z4 354 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 PPP4R1LQ9P1A2 415 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 CACFD1Q9UGQ2 172 aa11.66□□□□□ -0.54
VRK3-209ENST00000594948 IGKV1-9A0A0C4DH69 117 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 SHISA7A6NL88 538 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 K7EPK0 472 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 EFNA2O43921 213 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 HOXB5P09067 269 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PI3P19957 117 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 NME2P22392 152 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PTAFRP25105 342 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PTGFRP43088 359 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 KCNJ3P48549 501 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 MYBPHQ13203 477 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PLPPR5Q32ZL2 321 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 CHRFAM7AQ494W8 412 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PRSS58Q8IYP2 241 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 FAM71E2Q8N5Q1 922 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 ZNF784Q8NCA9 323 aaPredicted RBP11.65□□□□□ -0.54
VRK3-209ENST00000594948 APCDD1LQ8NCL9 501 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 FNDC9Q8TBE3 224 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
VRK3-209ENST00000594948 OXGR1Q96P68 337 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PRRX2Q99811 253 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 ZNF319Q9P2F9 582 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 VDAC3Q9Y277 283 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 V9GYS6 101 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 RALGAPA1Q6GYQ0 2036 aa11.65□□□□□ -0.54
VRK3-209ENST00000594948 IGLV3-12A0A075B6K2 115 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 IGHV1OR21-1A0A087WYE8 117 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 IGHV1OR15-9A0A0B4J2B8 117 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 A0A0U1RQV5 110 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 A0A1W2PP11 408 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 CRYM-AS1A6NIL9 109 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 IFNA21P01568 189 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 HPNP05981 417 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 NR2C1P13056 603 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 CPT2P23786 658 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 FKBP2P26885 142 aaKnown RBP11.65□□□□□ -0.55
VRK3-209ENST00000594948 FCGR2CP31995 323 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 HNRNPKP61978 463 aaKnown RBP eCLIP11.65□□□□□ -0.55
VRK3-209ENST00000594948 LSM6P62312 80 aaKnown RBP11.65□□□□□ -0.55
VRK3-209ENST00000594948 HABP2Q14520 560 aaPredicted RBP11.65□□□□□ -0.55
VRK3-209ENST00000594948 KISS1Q15726 138 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 SWI5Q1ZZU3 235 aa11.65□□□□□ -0.55
VRK3-209ENST00000594948 IAH1Q2TAA2 248 aaPredicted RBP11.65□□□□□ -0.55
VRK3-209ENST00000594948 DHRS11Q6UWP2 260 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms