RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 TRBV5-4A0A0C4DH59 114 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 A0A1B0GVY2 172 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 MIF4GDA9UHW6 222 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 NPIPA5E9PKD4 350 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 hCG_2039718K7EN88 272 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 LAD1O00515 517 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 BIRC5O15392 142 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 TGOLN2O43493 480 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 BCL2L11O43521 198 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 EIF4E2O60573 245 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 HPGDSO60760 199 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 CTNSO60931 367 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SRSF10O75494 262 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SERPINA1P01009 418 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 HLA-AP01891 365 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 BCKDHAP12694 445 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 UCHL3P15374 230 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 VHLP40337 213 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OPRD1P41143 372 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 QARSP47897 775 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 DAP3P51398 398 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 RAG2P55895 527 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OR4D2P58180 307 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 RPS15AP62244 130 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 MRPS22P82650 360 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 AESQ08117 197 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SRSF6Q13247 344 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 EIF4EBP2Q13542 120 aaPredicted RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SF3A2Q15428 464 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SLC9A3R2Q15599 337 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF658BQ4V348 819 aaPredicted RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 CYBRD1Q53TN4 286 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 LEMD1Q68G75 181 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 ACSM5Q6NUN0 579 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 CXCL17Q6UXB2 119 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 Q6ZRG5 221 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SLC25A48Q6ZT89 311 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 PLA2G4DQ86XP0 818 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 LINC00518Q8N0U6 118 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OR2L5Q8NG80 312 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OR51D1Q8NGF3 324 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OR52N1Q8NH53 320 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 OR51A7Q8NH64 312 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 BAALCQ8WXS3 180 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 IFT81Q8WYA0 676 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 CREB3L1Q96BA8 519 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 FAF2Q96CS3 445 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 YIPF6Q96EC8 236 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 WDR34Q96EX3 536 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 Q96MT0 163 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 KCNA7Q96RP8 456 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 COPS4Q9BT78 406 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 TRABDQ9H4I3 376 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 C6orf50Q9HD87 102 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 CUTCQ9NTM9 273 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 PAK1IP1Q9NWT1 392 aaPredicted RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 DUS2Q9NX74 493 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 ENOPH1Q9UHY7 261 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 RAB26Q9ULW5 256 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 UBQLN1Q9UMX0 589 aaKnown RBP3.81□□□□□ -1.8
SMAD4-216ENST00000593223 SHROOM3Q8TF72 1996 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 DOCK1Q14185 1865 aa3.81□□□□□ -1.8
SMAD4-216ENST00000593223 COL11A1P12107 1806 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 A0A0A6YYD5 115 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 A0A1B0GUS0 222 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 TEX48A0A1B0GUV7 120 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 VSTM2BA6NLU5 285 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 SRRM4A7MD48 611 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 SYCE1LA8MT33 242 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 FTCDNL1E5RQL4 147 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 E9PAM4 449 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 H7C0C1 242 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 NOS1APO75052 506 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CTDNEP1O95476 244 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 KRT75O95678 551 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ISG15P05161 165 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CALB1P05937 261 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 HBQ1P09105 142 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 TACSTD2P09758 323 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CCDC166P0CW27 439 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ZNF35P13682 527 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 RPL4P36578 427 aaKnown RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 GABRA4P48169 554 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 EMDP50402 254 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PRKXP51817 358 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 AP2S1P53680 142 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 SLC35B1P78383 322 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 TNFRSF9Q07011 255 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 RIPPLY1Q0D2K3 151 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 MAD2L1BPQ15013 274 aaPredicted RBP3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ARL6IP1Q15041 203 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ISXQ2M1V0 245 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 ACSM3Q53FZ2 586 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 DMRTC1Q5HYR2 192 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 PPM1LQ5SGD2 360 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 CCNJQ5T5M9 372 aa3.8□□□□□ -1.8
SMAD4-216ENST00000593223 HACD4Q5VWC8 232 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms