RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 U3KQA8 63 aa8.7□□□□□ -1.02
LIG3-216ENST00000593099 NUP210Q8TEM1 1887 aaPredicted RBP8.7□□□□□ -1.02
LIG3-216ENST00000593099 H7C417 338 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ABCD4O14678 606 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 GATCO43716 136 aaKnown RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 HPGDSO60760 199 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 AQP8O94778 261 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 PRSS23O95084 383 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 MPZL1O95297 269 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 PTH2RP49190 550 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SMIM21Q3B7S5 101 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ELMOD3Q96FG2 381 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 CCDC32Q9BV29 185 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 GON7Q9BXV9 100 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SLC7A10Q9NS82 523 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ASF1BQ9NVP2 202 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SCN2AQ99250 2005 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 UPK3AO75631 287 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SERPINE2P07093 398 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 CCL2P13500 99 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 HLA-DOBP13765 273 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 PPP3CBP16298 524 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 LY6DQ14210 128 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 HYAL4Q2M3T9 481 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 HFEQ30201 348 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SCCPDHQ8NBX0 429 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 OR13F1Q8NGS4 319 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 TAAR3PQ9P1P4 343 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 RNF212BA8MTL3 300 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 TFAP2AP05549 437 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 AKAIN1P0CW23 69 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 JUNBP17275 347 aaPredicted RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 TAS2R46P59540 309 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 S100A10P60903 97 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 CMBLQ96DG6 245 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 UBL7Q96S82 380 aaPredicted RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 UBTD1Q9HAC8 227 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 HPNP05981 417 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ASAH2BP0C7U1 165 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 CPEP16870 476 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ALOX5APP20292 161 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 PCSK6P29122 969 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 TNFAIP6P98066 277 aaPredicted RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 TPBGQ13641 420 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 SLC51BQ86UW2 128 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 ZFP62Q8NB50 900 aaPredicted RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 FAM216AQ8WUB2 273 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 TMEM171Q8WVE6 324 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SPSB1Q96BD6 273 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 B3GNT2Q9NY97 397 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 FZR1Q9UM11 496 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 POMT1Q9Y6A1 747 aa8.69□□□□□ -1.02
LIG3-216ENST00000593099 SPTAN1Q13813 2472 aaKnown RBP8.69□□□□□ -1.02
LIG3-216ENST00000593099 A0A1B0GVC2 190 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 MEIS3P1A6NDR6 274 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 NAP1L6A6NFF2 107 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ZNF724A8MTY0 619 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 KRBOX1C9JBD0 128 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 BET1O15155 118 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 TOX4O94842 621 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ALX3O95076 343 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ATF1P18846 271 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PPP5CP53041 499 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ZNF181Q2M3W8 571 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PLXDC2Q6UX71 529 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 MRPL41Q8IXM3 137 aaKnown RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 BATF2Q8N1L9 274 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PIK3IP1Q96FE7 263 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 SPACA5Q96QH8 159 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 BANF2Q9H503 90 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ISG20L2Q9H9L3 353 aaKnown RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 CYSLTR2Q9NS75 346 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 MSTNO14793 375 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 KNG1P01042 644 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 AKR1C4P17516 323 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ATPAF1Q5TC12 328 aaPredicted RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 POC1BQ8TC44 478 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 SLC7A6Q92536 515 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 PRRT1Q99946 306 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 OR2H1Q9GZK4 316 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 GP6Q9HCN6 339 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 EHFQ9NZC4 300 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 FOXD3Q9UJU5 478 aaPredicted RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 NPIPB9F8W1W9 429 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 HS3ST1O14792 307 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 GCM2O75603 506 aaPredicted RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 SCGB1D1O95968 90 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 SFTPBP07988 381 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 H2AFB2P0C5Z0 115 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 HOXB1P14653 301 aaPredicted RBP8.68□□□□□ -1.02
LIG3-216ENST00000593099 HLA-DMAP28067 261 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ALDH3B1P43353 468 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 TAS2R19P59542 299 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 ACTBL2Q562R1 376 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 SLC36A1Q7Z2H8 476 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 OR10K1Q8NGX5 313 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 OR2AE1Q8NHA4 323 aa8.68□□□□□ -1.02
LIG3-216ENST00000593099 FAM57AQ8TBR7 257 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms