RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 RPL3LQ92901 407 aaKnown RBP16.84■□□□□ 0.29
TRIM47-207ENST00000593089 C12orf43Q96C57 262 aaKnown RBP16.84■□□□□ 0.29
TRIM47-207ENST00000593089 FEVQ99581 238 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 RTL8AQ9BWD3 113 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 TLNRD1Q9H1K6 362 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 DPAGT1Q9H3H5 408 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 MUC13Q9H3R2 512 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 RGCCQ9H4X1 137 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 HAO2Q9NYQ3 351 aa16.84■□□□□ 0.29
TRIM47-207ENST00000593089 A0A1W2PRD5 423 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 A0A1W2PRF3 423 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 A0A1W2PRM7 423 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 ZNF850A8MQ14 1090 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 M0QZ24 198 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 TFF1P04155 84 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 SELLP14151 372 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 PAICSP22234 425 aaKnown RBP16.83■□□□□ 0.28
TRIM47-207ENST00000593089 DLX1P56177 255 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 PRDX4Q13162 271 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 SNCBQ16143 134 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 LRRC10Q5BKY1 277 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 STUMQ69YW2 141 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 CD300LDQ6UXZ3 194 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 KCTD8Q6ZWB6 473 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 RHOUQ7L0Q8 258 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 GIPC3Q8TF64 312 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 THEM6Q8WUY1 208 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 DCTN5Q9BTE1 182 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 WDR13Q9H1Z4 485 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 MPC1Q9Y5U8 109 aa16.83■□□□□ 0.28
TRIM47-207ENST00000593089 NKX6-3A6NJ46 265 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 TIMM23O14925 209 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 SELENOFO60613 162 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 LYNP07948 512 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 ACKR3P25106 362 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 POU1F1P28069 291 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 TGM4P49221 684 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 TAF9Q16594 264 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 PLBD1Q6P4A8 553 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 GDPGP1Q6ZNW5 385 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 ARHGAP24Q8N264 748 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 OTOSQ8NHW6 89 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 LRTOMTQ8WZ04 291 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 PIGCQ92535 297 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 TAS2R1Q9NYW7 299 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 ZNF391Q9UJN7 358 aa16.82■□□□□ 0.28
TRIM47-207ENST00000593089 CAB39Q9Y376 341 aaPredicted RBP16.82■□□□□ 0.28
TRIM47-207ENST00000593089 PRR23D1E9PI22 279 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-207ENST00000593089 RNASEK-C17orf49H0YIS7 233 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 GPR37O15354 613 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 AKR7A2O43488 359 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 CST1P01037 141 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 FBP1P09467 338 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 PRR23D2P0DMB1 279 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-207ENST00000593089 RAP2AP10114 183 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 GUCA2AQ02747 115 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 KLRD1Q13241 179 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 OCLNQ16625 522 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 ATPAF1Q5TC12 328 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-207ENST00000593089 METAP1DQ6UB28 335 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-207ENST00000593089 Q8N7P7 452 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 OR10Z1Q8NGY1 313 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 OR5P3Q8WZ94 311 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 NSL1Q96IY1 281 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 RNF170Q96K19 258 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 LYZL4Q96KX0 146 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 LRGUKQ96M69 825 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 RAB3IPQ96QF0 476 aaPredicted RBP16.81■□□□□ 0.28
TRIM47-207ENST00000593089 PKP2Q99959 881 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 ZNRD1Q9P1U0 126 aa16.81■□□□□ 0.28
TRIM47-207ENST00000593089 BTBD17A6NE02 478 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 TMEM210A6NLX4 147 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 NPFFO15130 113 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 CLPXO76031 633 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 EEF1B2P24534 225 aaKnown RBP16.8■□□□□ 0.28
TRIM47-207ENST00000593089 PROK1P58294 105 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 GINS1Q14691 196 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 ASPHD2Q6ICH7 369 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 Q6ZSV7 163 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 PNKDQ8N490 385 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 ZNF454Q8N9F8 522 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 NPRL2Q8WTW4 380 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 CCDC124Q96CT7 223 aaKnown RBP16.8■□□□□ 0.28
TRIM47-207ENST00000593089 DMRTB1Q96MA1 342 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 GAFA1Q96PS6 74 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 RBM4BQ9BQ04 359 aaKnown RBP16.8■□□□□ 0.28
TRIM47-207ENST00000593089 FGF23Q9GZV9 251 aaPredicted RBP16.8■□□□□ 0.28
TRIM47-207ENST00000593089 MMP27Q9H306 513 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 ABCB9Q9NP78 766 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 KLHDC2Q9Y2U9 406 aa16.8■□□□□ 0.28
TRIM47-207ENST00000593089 CST4P01036 141 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 DGUOKQ16854 277 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 DHRS7BQ6IAN0 325 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-207ENST00000593089 ZNF788Q6ZQV5 615 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 TMEM179BQ7Z7N9 219 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 ZDHHC23Q8IYP9 409 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 ZSCAN4Q8NAM6 433 aaPredicted RBP16.79■□□□□ 0.28
TRIM47-207ENST00000593089 OR8B12Q8NGG6 310 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 C8orf46Q8TAG6 207 aa16.79■□□□□ 0.28
TRIM47-207ENST00000593089 HPSE2Q8WWQ2 592 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms