RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 HAVCR1Q96D42 359 aa8.2□□□□□ -1.1
DDX39A-220ENST00000593008 YIPF6Q96EC8 236 aa8.2□□□□□ -1.1
DDX39A-220ENST00000593008 NDUFB11Q9NX14 153 aa8.2□□□□□ -1.1
DDX39A-220ENST00000593008 DCAF16Q9NXF7 216 aa8.2□□□□□ -1.1
DDX39A-220ENST00000593008 ZNF281Q9Y2X9 895 aa8.2□□□□□ -1.1
DDX39A-220ENST00000593008 ZANQ9Y493 2812 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 TRAV8-7A0A075B6U6 113 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 IGKV1-9A0A0C4DH69 117 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 IQCF6A8MYZ5 107 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 RNF223E7ERA6 249 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 F5H5P2 479 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 J3QW42 95 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 IGHV3-13P01766 116 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 ISG15P05161 165 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 RAC2P15153 192 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 JUNBP17275 347 aaPredicted RBP8.19□□□□□ -1.1
DDX39A-220ENST00000593008 KITLGP21583 273 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 THBS2P35442 1172 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 TAS2R43P59537 309 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 LSM3P62310 102 aaKnown RBP8.19□□□□□ -1.1
DDX39A-220ENST00000593008 BDH1Q02338 343 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 PRDX4Q13162 271 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 EFNB3Q15768 340 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 NKPD1Q17RQ9 610 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 PRAMEF6Q5VXH4 476 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 CLEC9AQ6UXN8 241 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 DOK3Q7L591 496 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 SATL1Q86VE3 508 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 EGFL6Q8IUX8 553 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 BATF2Q8N1L9 274 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 SEMA6DQ8NFY4 1073 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 OR5L1Q8NGL2 311 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 OR13F1Q8NGS4 319 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 TRMT10AQ8TBZ6 339 aaKnown RBP8.19□□□□□ -1.1
DDX39A-220ENST00000593008 COX4I2Q96KJ9 171 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 DERL3Q96Q80 235 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 SPACA5Q96QH8 159 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 ADAT1Q9BUB4 502 aaKnown RBP8.19□□□□□ -1.1
DDX39A-220ENST00000593008 PAPOLGQ9BWT3 736 aaKnown RBP8.19□□□□□ -1.1
DDX39A-220ENST00000593008 COMMD4Q9H0A8 199 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 TREM2Q9NZC2 230 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 HHLA2Q9UM44 414 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 DHDHQ9UQ10 334 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 CACNG2Q9Y698 323 aa8.19□□□□□ -1.1
DDX39A-220ENST00000593008 ARFGEF3Q5TH69 2177 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 NIPBLQ6KC79 2804 aaeCLIP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 IGKV1-27A0A075B6S5 117 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 TRBV5-7A0A0A0MS05 114 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 LOC100506127A0A0U1RQW1 187 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 LYNX1G3V0Z9 82 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 CCRL2O00421 344 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 GABRPO00591 440 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 LY6G6DO95868 133 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 ERCC1P07992 297 aaPredicted RBP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 OCM2P0CE71 109 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 LYNX1P0DP58 116 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 CD36P16671 472 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 SNRPD2P62316 118 aaKnown RBP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 MRPL28Q13084 256 aaKnown RBP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 UBE2V2Q15819 145 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 ACSM3Q53FZ2 586 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 TMEM244Q5VVB8 128 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 C22orf42Q6IC83 251 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 CRIP3Q6Q6R5 217 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 SLC16A12Q6ZSM3 486 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 Q6ZSR3 168 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 BIVMQ86UB2 503 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 ZNF525Q8N782 197 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 DNAAF1Q8NEP3 725 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 OR8G5Q8NG78 346 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 OR2Z1Q8NG97 314 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 PIGCQ92535 297 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 FCGR1BQ92637 280 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 TMEM106AQ96A25 262 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 RFT1Q96AA3 541 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 SORCS2Q96PQ0 1159 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 GFI1Q99684 422 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 VRK1Q99986 396 aaPredicted RBP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 SLC30A2Q9BRI3 323 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 CHCHD6Q9BRQ6 235 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 CENPOQ9BU64 300 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 RGCCQ9H4X1 137 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 PLEKHA1Q9HB21 404 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 DYNLRB1Q9NP97 96 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 ISYNA1Q9NPH2 558 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 NOX4Q9NPH5 578 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 ZNF275Q9NSD4 429 aaPredicted RBP8.18□□□□□ -1.1
DDX39A-220ENST00000593008 PMF1-BGLAPU3KQ54 211 aa8.18□□□□□ -1.1
DDX39A-220ENST00000593008 IGHV4-30-2A0A087WSY4 118 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 ZNF816-ZNF321PA0A0X1KG74 233 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 ZNF879B4DU55 563 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 B9A039 149 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 H7C417 338 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 M0R233 179 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 SC5DO75845 299 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 RGS9O75916 674 aaPredicted RBP8.17□□□□□ -1.1
DDX39A-220ENST00000593008 PLATP00750 562 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 HPXP02790 462 aa8.17□□□□□ -1.1
DDX39A-220ENST00000593008 CLEC2LP0C7M8 214 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms