RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TGOLN2O43493 480 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 CLEC3AO75596 197 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 CA3P07451 260 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 PNLIPP16233 465 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 PLA2G5P39877 138 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 RND3P61587 244 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 RAB1AP62820 205 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 PCK2Q16822 640 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 COL13A1Q5TAT6 717 aaPredicted RBP13.47□□□□□ -0.25
CIRBP-228ENST00000590347 MRPL41Q8IXM3 137 aaKnown RBP13.47□□□□□ -0.25
CIRBP-228ENST00000590347 FAM185AQ8N0U4 392 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 M1APQ8TC57 530 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 NMNAT2Q9BZQ4 307 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.47□□□□□ -0.25
CIRBP-228ENST00000590347 WDR87Q6ZQQ6 2873 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 JTBO76095 146 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 NXPH3O95157 252 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 PAX5Q02548 391 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 PMS2P11Q13670 270 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 HERPUD1Q15011 391 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 TSPO2Q5TGU0 170 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 OR52N4Q8NGI2 321 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 RAB24Q969Q5 203 aa13.47□□□□□ -0.25
CIRBP-228ENST00000590347 P2RY10O00398 339 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 CD1AP06126 327 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 DANCRP0C864 163 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 SLC25A1P53007 311 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 DCAF7P61962 342 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 PRDX1Q06830 199 aaKnown RBP13.46□□□□□ -0.25
CIRBP-228ENST00000590347 OR5I1Q13606 314 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 C1QL3Q5VWW1 255 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 NPSR1Q6W5P4 371 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 HOGA1Q86XE5 327 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 CDC20BQ86Y33 519 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 COMMD1Q8N668 190 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM52Q8NDY8 209 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 ADAMTS18Q8TE60 1221 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 NUS1Q96E22 293 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 LMLNQ96KR4 655 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 OR1A2Q9Y585 309 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 MED12Q93074 2177 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 CCDC187A0A096LP49 1063 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 SOCS1O15524 211 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 MRPS11P82912 194 aaKnown RBP13.46□□□□□ -0.25
CIRBP-228ENST00000590347 FAM166AQ6J272 317 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 DPY19L2P2Q6ZN68 376 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 LINC00346Q8IVM7 164 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 EXD3Q8N9H8 876 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 PLPP5Q8NEB5 264 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 RNASE8Q8TDE3 154 aaKnown RBP13.46□□□□□ -0.25
CIRBP-228ENST00000590347 TMEM37Q8WXS4 190 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 PRRX2Q99811 253 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 PBDC1Q9BVG4 233 aa13.46□□□□□ -0.25
CIRBP-228ENST00000590347 PRRT4C9JH25 899 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 RPL36A-HNRNPH2H7BZ11 118 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 HSD17B6O14756 317 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 MPIG6BO95866 241 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 IRF2P14316 349 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 ALG10Q5BKT4 473 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 DGAT2L6Q6ZPD8 337 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 RTBDNQ9BSG5 229 aaPredicted RBP13.46□□□□□ -0.26
CIRBP-228ENST00000590347 ADAM29Q9UKF5 820 aa13.46□□□□□ -0.26
CIRBP-228ENST00000590347 A6NIZ1 184 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 HRKO00198 91 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 IGKV1D-16P01601 117 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 ALDH3B1P43353 468 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 NOVA1P51513 510 aaKnown RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 RAP1BP61224 184 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 COL10A1Q03692 680 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 Q6ZVH6 145 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 OR5D18Q8NGL1 313 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 AQP3Q92482 292 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 PLA2G3Q9NZ20 509 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 POMT1Q9Y6A1 747 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 ELOA3CA0A087WX78 387 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 FCARP24071 287 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 ELLP55199 621 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 MLF1P58340 268 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 ARFRP1Q13795 201 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 MLF2Q15773 248 aaPredicted RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 CPEB3Q8NE35 698 aaKnown RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 OR5R1Q8NH85 324 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 FGGYQ96C11 551 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 CDC6Q99741 560 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 RAB18Q9NP72 206 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 DNAJB12Q9NXW2 375 aaKnown RBP13.45□□□□□ -0.26
CIRBP-228ENST00000590347 GRHPRQ9UBQ7 328 aa13.45□□□□□ -0.26
CIRBP-228ENST00000590347 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 RBFOX3A6NFN3 312 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 XKRYO14609 159 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 SUMF1Q8NBK3 374 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 GPR132Q9UNW8 380 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 PHF3Q92576 2039 aaKnown RBP13.44□□□□□ -0.26
CIRBP-228ENST00000590347 FGF17O60258 216 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 RAD51DO75771 328 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 OR6A2O95222 327 aa13.44□□□□□ -0.26
CIRBP-228ENST00000590347 LMO1P25800 156 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms