RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 F5H5K5 113 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 SYNGR3O43761 229 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 CDC14BO60729 498 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 NEURL1O76050 574 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 RGS11O94810 467 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 AMY2AP04746 511 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 RLN1P04808 185 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 TPOP07202 933 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 RFPL3SP0C7P2 107 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 VSIG10L2P0DP72 767 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 ITGA3P26006 1051 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 CD96P40200 585 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 CBX5P45973 191 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 GNG2P59768 71 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 KLRB1Q12918 225 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR1C1Q15619 314 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 GFOD2Q3B7J2 385 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 KRTAP27-1Q3LI81 207 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 Q5BKY6 102 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 RTL6Q6ICC9 239 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR10K2Q6IF99 312 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 CHMP1BQ7LBR1 199 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 ZDHHC22Q8N966 263 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 CHST4Q8NCG5 386 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 STEAP2Q8NFT2 490 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR56B1Q8NGI3 324 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR4D10Q8NGI6 311 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR2T35Q8NGX2 323 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 OR1F12Q8NHA8 337 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 SPSB1Q96BD6 273 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 FBXO17Q96EF6 278 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 LYZL4Q96KX0 146 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 C1orf147Q96MC9 270 aaPredicted RBP8.71□□□□□ -1.02
VPS25-202ENST00000589219 GPER1Q99527 375 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 FOXB1Q99853 325 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 TMPRSS13Q9BYE2 586 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 LINC00470Q9BZP3 86 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 LPAR5Q9H1C0 372 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 RGCCQ9H4X1 137 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.71□□□□□ -1.02
VPS25-202ENST00000589219 ZNF319Q9P2F9 582 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 COL12A1Q99715 3063 aa8.71□□□□□ -1.02
VPS25-202ENST00000589219 H3BUI4 141 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 CA11O75493 328 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 OR2A4O95047 310 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 FARS2O95363 451 aaKnown RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 SYNGR4O95473 234 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 MPIG6BO95866 241 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 ZNF735P0CB33 412 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 HIST1H1DP16402 221 aaKnown RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 ZNF24P17028 368 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 OR3A4PP47883 348 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 LHX2P50458 406 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 GK2Q14410 553 aaPredicted RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 PPA1Q15181 289 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 CNN3Q15417 329 aaKnown RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 CDNFQ49AH0 187 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 ATP1A1-AS1Q5TC04 95 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 LPCAT3Q6P1A2 487 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 IDO2Q6ZQW0 420 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 NAA40Q86UY6 237 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 GALNT16Q8N428 558 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 LRRC18Q8N456 261 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 OR2AK2Q8NG84 335 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 OR8S1Q8NH09 359 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 TNFAIP8L1Q8WVP5 186 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 RAB3CQ96E17 227 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 ALKBH3Q96Q83 286 aaPredicted RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 OR2A7Q96R45 310 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 GAL3ST1Q99999 423 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 RNF122Q9H9V4 155 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 CRLF2Q9HC73 371 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 GPR35Q9HC97 309 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 MCTS1Q9ULC4 181 aaKnown RBP8.7□□□□□ -1.02
VPS25-202ENST00000589219 TP53TG5Q9Y2B4 290 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 KIAA1549Q9HCM3 1950 aa8.7□□□□□ -1.02
VPS25-202ENST00000589219 IGKV1-9A0A0C4DH69 117 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 F5H5P2 479 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 G3V3Q6 166 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 M0QYG6 137 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 NAT2P11245 290 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 ZNF708P17019 499 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 NAT1P18440 290 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 PRKACBP22694 351 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 HTR5AP47898 357 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 STARP49675 285 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 CLDN15P56746 228 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SNRPD2P62316 118 aaKnown RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 RPS27AP62979 156 aaKnown RBP8.69□□□□□ -1.02
VPS25-202ENST00000589219 PLGLB1Q02325 96 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 KISS1Q15726 138 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 HYAL4Q2M3T9 481 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 CEACAM16Q2WEN9 425 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 C4orf46Q504U0 113 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SLC16A14Q7RTX9 510 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 ZNF100Q8IYN0 542 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SLC7A5P1Q8MH63 180 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 SEMA6DQ8NFY4 1073 aa8.69□□□□□ -1.02
VPS25-202ENST00000589219 OR11H4Q8NGC9 324 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms