RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 PPP1R14AQ96A00 147 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 REEP6Q96HR9 211 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 SSX3Q99909 188 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 V9GYQ6 96 aa11.2□□□□□ -0.62
CLPTM1-208ENST00000588274 IGKV1D-17A0A075B6S4 117 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 PAHP00439 452 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 RRM2P31350 389 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 PSME3P61289 254 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 CRMP1Q14194 572 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 LY6EQ16553 131 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 LRRC75BQ2VPJ9 315 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 OR9Q2Q8NGE9 314 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 OR4C15Q8NGM1 316 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 OR4Q3Q8NH05 313 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 RNF133Q8WVZ7 376 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 H1FXQ92522 213 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 RPL3LQ92901 407 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 PHF21AQ96BD5 680 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 DUS3LQ96G46 650 aaKnown RBP11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 MMP28Q9H239 520 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 GORASP2Q9H8Y8 452 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 IL20Q9NYY1 176 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 SLC25A10Q9UBX3 287 aaPredicted RBP11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF391Q9UJN7 358 aa11.19□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF593O00488 134 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 TBX1O43435 398 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 AKR7A2O43488 359 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 ACAA1P09110 424 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 SPI1P17947 270 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 OPRL1P41146 370 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 NAA10P41227 235 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 SLC25A1P53007 311 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 LOXL3P58215 753 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF121P58317 390 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 GMFBP60983 142 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 HABP2Q14520 560 aaPredicted RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 KRT74Q7RTS7 529 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 RNF148Q8N7C7 305 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 GNPDA2Q8TDQ7 276 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 OR5P3Q8WZ94 311 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 PYURFQ96I23 114 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 LYZL4Q96KX0 146 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 PAPOLGQ9BWT3 736 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 NSRP1Q9H0G5 558 aaKnown RBP11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 CCDC134Q9H6E4 229 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 EFCAB1Q9HAE3 211 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 SPAG4Q9NPE6 437 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 C19orf12Q9NSK7 152 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 CENPMQ9NSP4 180 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 NECAP2Q9NVZ3 263 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 N6AMT1Q9Y5N5 214 aa11.18□□□□□ -0.62
CLPTM1-208ENST00000588274 NKX6-3A6NJ46 265 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 RHBDL1O75783 438 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 CST4P01036 141 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 CD28P10747 220 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 BMXP51813 675 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 HMGA2P52926 109 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 SMIM11AP58511 58 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 PRDX4Q13162 271 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 KRT72Q14CN4 511 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 TIGD6Q17RP2 521 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 LDLRAD2Q5SZI1 272 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 CCBE1Q6UXH8 406 aaPredicted RBP11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 FAM57BQ71RH2 274 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 HDXQ7Z353 690 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNRF1Q8ND25 227 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 OR51G2Q8NGK0 314 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 OR2T6Q8NHC8 308 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 ABHD6Q9BV23 337 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 WNT10AQ9GZT5 417 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 NLKQ9UBE8 527 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 LYVE1Q9Y5Y7 322 aa11.17□□□□□ -0.62
CLPTM1-208ENST00000588274 TMEM210A6NLX4 147 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 OR2AT4A6NND4 320 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 VGLL3A8MV65 326 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 ANXA2P07355 339 aaKnown RBP11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 VSIG10L2P0DP72 767 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 FMO3P31513 532 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 IL5RAQ01344 420 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 RPL13AP3Q6NVV1 102 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 MKXQ8IYA7 352 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 CSNK2A3Q8NEV1 391 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 OR52H1Q8NGJ2 320 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 RTL8AQ9BWD3 113 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 MYLK2Q9H1R3 596 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 SP140LQ9H930 580 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 IL1RAPQ9NPH3 570 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 DNAJC27Q9NZQ0 273 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 MPC1Q9Y5U8 109 aa11.16□□□□□ -0.62
CLPTM1-208ENST00000588274 RYR2Q92736 4967 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 TRBV23-1A0A0A0MS06 115 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 A0A1W2PQ09 198 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 FAM90A8PA6NJQ4 464 aa11.15□□□□□ -0.62
CLPTM1-208ENST00000588274 ZNF850A8MQ14 1090 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms