RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 BDKRB2P30411 391 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 MRPL49Q13405 166 aaKnown RBP12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF260Q3ZCT1 412 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 PXDC1Q5TGL8 231 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 H1FNTQ75WM6 255 aaPredicted RBP12.84□□□□□ -0.35
CCDC43-203ENST00000588210 FADS6Q8N9I5 356 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 LHFPL5Q8TAF8 219 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ST8SIA2Q92186 375 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 LDAHQ9H6V9 325 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 CHST11Q9NPF2 352 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 MRPS18CQ9Y3D5 142 aaKnown RBP12.84□□□□□ -0.35
CCDC43-203ENST00000588210 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 OR14I1A6ND48 311 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 WIPF3A6NGB9 483 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 RAB27BO00194 218 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 H2BFMP0C1H6 154 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 MSX1P28360 303 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 APOBEC1P41238 236 aaKnown RBP12.84□□□□□ -0.35
CCDC43-203ENST00000588210 OR7A5Q15622 319 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF813Q6ZN06 617 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ZNF546Q86UE3 836 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 WDFY1Q8IWB7 410 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 KCNRGQ8N5I3 272 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ZDHHC22Q8N966 263 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ACBD4Q8NC06 268 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 OR2M3Q8NG83 312 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 OR4K17Q8NGC6 315 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 FAM46BQ96A09 425 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 PTGES2Q9H7Z7 377 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 ZMAT3Q9HA38 289 aaKnown RBP12.84□□□□□ -0.35
CCDC43-203ENST00000588210 FAM206AQ9NX38 181 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 KLHL13Q9P2N7 655 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 GLS2Q9UI32 602 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 FBXL2Q9UKC9 423 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 VSIG4Q9Y279 399 aa12.84□□□□□ -0.35
CCDC43-203ENST00000588210 SVILO95425 2214 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 TRGV5A0A0B4J1U4 118 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 IGKV1D-43A0A0B4J1Z2 117 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 A0A1B0GW55 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 ZNF208O43345 1280 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 BPNT1O95861 308 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 IL2RAP01589 272 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 HLA-AP01891 365 aaKnown RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L2P0CJ85 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L3P0CJ86 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L4P0CJ87 422 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L5P0CJ88 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L6P0CJ89 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4L7P0CJ90 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 HLA-GP17693 338 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 SRD5A2P31213 254 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 UQCRFS1P47985 274 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DSCR4P56555 118 aaPredicted RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 HSF1Q00613 529 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 POU3F1Q03052 451 aaPredicted RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 SCGB2B2Q4G0G5 96 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 RNASE10Q5GAN6 216 aaKnown RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 SLC25A42Q86VD7 318 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 FJX1Q86VR8 437 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 RELTQ969Z4 430 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 ARL5BQ96KC2 179 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 NPAS1Q99742 590 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 NUDT16L1Q9BRJ7 211 aaKnown RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 CNTD2Q9H8S5 307 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 FANCFQ9NPI8 374 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 MYEF2Q9P2K5 600 aaKnown RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 DUX4Q9UBX2 424 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 ZNF230Q9UIE0 474 aaPredicted RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 TNFSF18Q9UNG2 199 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 NOP16Q9Y3C1 178 aaKnown RBP12.83□□□□□ -0.36
CCDC43-203ENST00000588210 HRH3Q9Y5N1 445 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 LIPGQ9Y5X9 500 aa12.83□□□□□ -0.36
CCDC43-203ENST00000588210 NCKAP5O14513 1909 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 AQP7O14520 342 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 TPD52L2O43399 206 aaKnown RBP12.82□□□□□ -0.36
CCDC43-203ENST00000588210 SCGNO76038 276 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 OR2F2O95006 317 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 TTRP02766 147 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 ZBTB25P24278 435 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 QRFPP83859 136 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 UNC119Q13432 240 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 OR2F1Q13607 317 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 LIN54Q6MZP7 749 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 LYG2Q86SG7 212 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 TRAPPC6BQ86SZ2 158 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.82□□□□□ -0.36
CCDC43-203ENST00000588210 OR4S1Q8NGB4 309 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 UQCC2Q9BRT2 126 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 RASL12Q9NYN1 266 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 ZNF835Q9Y2P0 537 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 EIF2S3LQ2VIR3 472 aaKnown RBP12.82□□□□□ -0.36
CCDC43-203ENST00000588210 C11orf87Q6NUJ2 197 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 C17orf107Q6ZR85 190 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 SLC22A24Q8N4F4 322 aa12.82□□□□□ -0.36
CCDC43-203ENST00000588210 PAQR4Q8N4S7 273 aaPredicted RBP12.82□□□□□ -0.36
CCDC43-203ENST00000588210 PXT1Q8NFP0 134 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms