RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 COPS4Q9BT78 406 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 MRPL13Q9BYD1 178 aaKnown RBP7.09□□□□□ -1.27
SDF2-204ENST00000587338 MRPS26Q9BYN8 205 aaKnown RBP7.09□□□□□ -1.27
SDF2-204ENST00000587338 C16orf95Q9H693 158 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 VCX3AQ9NNX9 186 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 PLCXD1Q9NUJ7 323 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 NECAP2Q9NVZ3 263 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 PAK1IP1Q9NWT1 392 aaPredicted RBP7.09□□□□□ -1.27
SDF2-204ENST00000587338 AURKAIP1Q9NWT8 199 aaPredicted RBP7.09□□□□□ -1.27
SDF2-204ENST00000587338 PSORS1C1Q9UIG5 152 aa7.09□□□□□ -1.27
SDF2-204ENST00000587338 IGKV1D-43A0A0B4J1Z2 117 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 IGHV1-69DA0A0B4J2H0 117 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 IRGMA1A4Y4 181 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 PRSS37A4D1T9 235 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 LRRC30A6NM36 301 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 ZNF879B4DU55 563 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 FADS2O95864 444 aaKnown RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 TXNDC12O95881 172 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 IGHV1-69P01742 117 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 HLA-DQA2P01906 255 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 MT-ND2P03891 347 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 CDK1P06493 297 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 MRPL3P09001 348 aaKnown RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 SMIM18P0DKX4 95 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 LAP3P28838 519 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 HTR1FP30939 366 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 ZNF133P52736 654 aaPredicted RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 ST3GAL4Q11206 333 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 HERPUD1Q15011 391 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 NEDD8Q15843 81 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 KLHL22Q53GT1 634 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 SLC25A30Q5SVS4 291 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 ARMC4Q5T2S8 1044 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 METTL11BQ5VVY1 283 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 ZNF773Q6PK81 442 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 KCTD8Q6ZWB6 473 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 ADCK1Q86TW2 530 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 MOGAT3Q86VF5 341 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 LDLRAD3Q86YD5 345 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 PDZD9Q8IXQ8 264 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 C1orf87Q8N0U7 546 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 SVOPQ8N4V2 548 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 C11orf44Q8N8P7 122 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 OR51G2Q8NGK0 314 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 OR2T4Q8NH00 348 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 PTP4A1Q93096 173 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 TMEM80Q96HE8 168 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 TSSK2Q96PF2 358 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 RBP7Q96R05 134 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 HCAR1Q9BXC0 346 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 SYT4Q9H2B2 425 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 DPAGT1Q9H3H5 408 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 CHCHD3Q9NX63 227 aaKnown RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 WARS2Q9UGM6 360 aaKnown RBP7.08□□□□□ -1.28
SDF2-204ENST00000587338 TIMM10BQ9Y5J6 103 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 COMMD3-BMI1R4GMX3 469 aa7.08□□□□□ -1.28
SDF2-204ENST00000587338 BTBD17A6NE02 478 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 CENPBD1B2RD01 187 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 SLC16A7O60669 478 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 CST2P09228 141 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 MMP9P14780 707 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 SPI1P17947 270 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 MYL12AP19105 171 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 GSTT1P30711 240 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 MAP2K4P45985 399 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 HTR5AP47898 357 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 SRP9P49458 86 aaKnown RBP7.07□□□□□ -1.28
SDF2-204ENST00000587338 SLC25A1P53007 311 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 PCBD1P61457 104 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 SLC35A2P78381 396 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 FAM27BQ5VT28 67 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 DNM1P34Q6PK57 102 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 DCDC5Q6ZRR9 648 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 SPARTQ8N0X7 666 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 C19orf18Q8NEA5 215 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 OR10H4Q8NGA5 316 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 OR52I1Q8NGK6 324 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 HAVCR1Q96D42 359 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 LGALS12Q96DT0 336 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 WDFY2Q96P53 400 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 TBX5Q99593 518 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 TEAD3Q99594 435 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 ALG12Q9BV10 488 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 NUAK2Q9H093 628 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 DUSP21Q9H596 190 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 TBCCD1Q9NVR7 557 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 CNOT2Q9NZN8 540 aaKnown RBP7.07□□□□□ -1.28
SDF2-204ENST00000587338 VPREB3Q9UKI3 123 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 STARD10Q9Y365 291 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 FAM96BQ9Y3D0 163 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 BIRC6Q9NR09 4857 aa7.07□□□□□ -1.28
SDF2-204ENST00000587338 A0A1W2PPL8 197 aa7.06□□□□□ -1.28
SDF2-204ENST00000587338 CCDC182A6NF36 153 aa7.06□□□□□ -1.28
SDF2-204ENST00000587338 ANKRD61A6NGH8 418 aa7.06□□□□□ -1.28
SDF2-204ENST00000587338 TVP23AA6NH52 213 aa7.06□□□□□ -1.28
SDF2-204ENST00000587338 F5H5P2 479 aa7.06□□□□□ -1.28
SDF2-204ENST00000587338 MYL12BO14950 172 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms