RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 CA10Q9NS85 328 aa11.31□□□□□ -0.6
SNX11-210ENST00000582104 V9GYS6 101 aa11.31□□□□□ -0.6
SNX11-210ENST00000582104 TRBV5-7A0A0A0MS05 114 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 CD300LBA8K4G0 201 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 H3BSA7 217 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 GABRPO00591 440 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 RGS9O75916 674 aaPredicted RBP11.3□□□□□ -0.6
SNX11-210ENST00000582104 FAHP16930 419 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 TGFBR1P36897 503 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 ADIPOQQ15848 244 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 ACSM3Q53FZ2 586 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 YIF1BQ5BJH7 314 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 OR5AS1Q8N127 324 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 MS4A15Q8N5U1 240 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 OR13C3Q8NGS6 347 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 TSEN15Q8WW01 171 aaKnown RBP11.3□□□□□ -0.6
SNX11-210ENST00000582104 GTF3AQ92664 365 aaKnown RBP11.3□□□□□ -0.6
SNX11-210ENST00000582104 FGGYQ96C11 551 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 SYT3Q9BQG1 590 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 CHCHD6Q9BRQ6 235 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 MRPL37Q9BZE1 423 aaKnown RBP11.3□□□□□ -0.6
SNX11-210ENST00000582104 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
SNX11-210ENST00000582104 TMEM160Q9NX00 188 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 LPAR3Q9UBY5 353 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 POU2F3Q9UKI9 436 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 SPEF1Q9Y4P9 236 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 ARFGEF3Q5TH69 2177 aa11.3□□□□□ -0.6
SNX11-210ENST00000582104 TRDV1A0A1B0GX56 115 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 LOC390937A0A1W2PQ73 354 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 SHISA3A0PJX4 238 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 DPPA5A6NC42 116 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZNF879B4DU55 563 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 DHRS3O75911 302 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 OCM2P0CE71 109 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 RAC2P15153 192 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZNF250P15622 560 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 CFPP27918 469 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZNF718Q3SXZ3 478 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 Q499Y3 187 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZNF672Q499Z4 452 aaPredicted RBP11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZMAT1Q5H9K5 638 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 DMRTC1Q5HYR2 192 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 MBNL2Q5VZF2 373 aaKnown RBP11.29□□□□□ -0.6
SNX11-210ENST00000582104 CEACAM19Q7Z692 300 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 CLVS1Q8IUQ0 354 aaPredicted RBP11.29□□□□□ -0.6
SNX11-210ENST00000582104 BHLHE23Q8NDY6 225 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 DERL3Q96Q80 235 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 CENPOQ9BU64 300 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 RBM38Q9H0Z9 239 aaKnown RBP11.29□□□□□ -0.6
SNX11-210ENST00000582104 ZNF442Q9H7R0 627 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 NOX4Q9NPH5 578 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 PURGQ9UJV8 347 aaKnown RBP11.29□□□□□ -0.6
SNX11-210ENST00000582104 STUB1Q9UNE7 303 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 DHDHQ9UQ10 334 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 PIGLQ9Y2B2 252 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 RHBDD3Q9Y3P4 386 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 CEPT1Q9Y6K0 416 aa11.29□□□□□ -0.6
SNX11-210ENST00000582104 YLPM1P49750 1951 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 IGLV3-9A0A075B6K5 115 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 LOC100506127A0A0U1RQW1 187 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 GGT3PA6NGU5 568 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 HLA-DPB1P04440 258 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 OR4A8P0C604 315 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 KITLGP21583 273 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 MAP2K3P46734 347 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 RPS23P62266 143 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 LSM3P62310 102 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 C22orf42Q6IC83 251 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 UNQ6126/PRO20091Q6UXV3 157 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 Q6ZR03 302 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 DNM1P46Q6ZS02 220 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 ANKRD13BQ86YJ7 626 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 SEMA6DQ8NFY4 1073 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 SYNPRQ8TBG9 265 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 DVL3Q92997 716 aaPredicted RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 MRPL24Q96A35 216 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 FGF23Q9GZV9 251 aaPredicted RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 OPA3Q9H6K4 179 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 EXOSC4Q9NPD3 245 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 CISD1Q9NZ45 108 aaKnown RBP11.28□□□□□ -0.6
SNX11-210ENST00000582104 DUSP13Q9UII6 198 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 ENPP5Q9UJA9 477 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 ZNF391Q9UJN7 358 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 CMAHPQ9Y471 501 aa11.28□□□□□ -0.6
SNX11-210ENST00000582104 TRAV8-7A0A075B6U6 113 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 IQCF6A8MYZ5 107 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 AIREO43918 545 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 GABARAPO95166 117 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 IGHV3-13P01766 116 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 UCHL1P09936 223 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 TUBG1P23258 451 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 CFL1P23528 166 aaKnown RBP11.27□□□□□ -0.61
SNX11-210ENST00000582104 PSMA1P25786 263 aaKnown RBP11.27□□□□□ -0.61
SNX11-210ENST00000582104 GCH1P30793 250 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 RIPPLY1Q0D2K3 151 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 TRAM1Q15629 374 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 CTF1Q16619 201 aa11.27□□□□□ -0.61
SNX11-210ENST00000582104 MST1LQ2TV78 715 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms