RNA–Protein interactions for RNA: ENST00000581679.1

NDEL1-211, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-211ENST00000581679 NIT2Q9NQR4 276 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 MBNL1Q9NR56 388 aaKnown RBP3.34□□□□□ -1.87
NDEL1-211ENST00000581679 OBP2AQ9NY56 170 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 WSB2Q9NYS7 404 aaPredicted RBP3.34□□□□□ -1.87
NDEL1-211ENST00000581679 TAS2R4Q9NYW5 299 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 THAP10Q9P2Z0 257 aaPredicted RBP3.34□□□□□ -1.87
NDEL1-211ENST00000581679 GRHPRQ9UBQ7 328 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 PILRAQ9UKJ1 303 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 ZNF346Q9UL40 294 aaKnown RBP3.34□□□□□ -1.87
NDEL1-211ENST00000581679 DHDHQ9UQ10 334 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 FARSAQ9Y285 508 aaKnown RBP3.34□□□□□ -1.87
NDEL1-211ENST00000581679 DTX4Q9Y2E6 619 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 TIMM10BQ9Y5J6 103 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 KPTNQ9Y664 436 aa3.34□□□□□ -1.87
NDEL1-211ENST00000581679 ATRXP46100 2492 aa3.34□□□□□ -1.88
NDEL1-211ENST00000581679 EML5Q05BV3 1969 aa3.34□□□□□ -1.88
NDEL1-211ENST00000581679 LTBP2Q14767 1821 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 NOTCH4Q99466 2003 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TBC1D3DA0A087WVF3 549 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 PRSS37A4D1T9 235 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 OR2W5A6NFC9 320 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 C4orf47A7E2U8 309 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TBC1D3LB9A6J9 549 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 EEF1E1-BLOC1S5C9J1V9 151 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 FAM157AC9JC47 383 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 H0YGG7 62 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 H7C1Q1 480 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RAB27BO00194 218 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 DCTN6O00399 190 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 XKRYO14609 159 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SMAD9O15198 467 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 OR2T1O43869 369 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 LRP3O75074 770 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 FARS2O95363 451 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 IGHV2-70P01814 119 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 IGHV2-5P01817 119 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 CSTBP04080 98 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 IFNA6P05013 189 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ISG15P05161 165 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ERCC1P07992 297 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 HOXC4P09017 264 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TBC1D3HP0C7X1 549 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 LIPCP11150 499 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 PRF1P14222 555 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ZNF44P15621 663 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 NFYBP25208 207 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 HSD11B1P28845 292 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 CD1CP29017 333 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 AVPR2P30518 371 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SERPINF1P36955 418 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 EIF2S3P41091 472 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 GLP1RP43220 463 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 LPAR6P43657 344 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 HAAOP46952 286 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 DNASE1L1P49184 302 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SULT1A2P50226 295 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 PPT1P50897 306 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RIDAP52758 137 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RAB38P57729 211 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ARF3P61204 181 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RPS16P62249 146 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SNRPEP62304 92 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RPS21P63220 83 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 IGLV3-21P80748 117 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SSBP2P81877 361 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 QRFPP83859 136 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 HOXA4Q00056 320 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SP3Q02447 781 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RPL18Q07020 188 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SKP2Q13309 424 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SGCGQ13326 291 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 FAM53BQ14153 422 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 KCNAB1Q14722 419 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 OR7A5Q15622 319 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 CST6Q15828 149 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SGCAQ16586 387 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 MEP1BQ16820 701 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ZNF260Q3ZCT1 412 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 KLHL26Q53HC5 615 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TMEM128Q5BJH2 165 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 VAX1Q5SQQ9 334 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TMEM268Q5VZI3 342 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TBC1D3CQ6IPX1 549 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 KCTD18Q6PI47 426 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 FIGLAQ6QHK4 219 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 BTNL8Q6UX41 500 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 NPSR1Q6W5P4 371 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RBMS3Q6XE24 437 aaKnown RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 RNF44Q7L0R7 432 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 KCTD9Q7L273 389 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 SLC16A13Q7RTY0 426 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 MDGA2Q7Z553 956 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 C1QL2Q7Z5L3 287 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 NAA40Q86UY6 237 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 CACUL1Q86Y37 369 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 LYPD6Q86Y78 171 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 TBC1D3Q8IZP1 549 aaPredicted RBP3.33□□□□□ -1.88
NDEL1-211ENST00000581679 KDM8Q8N371 416 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 ARRDC1Q8N5I2 433 aa3.33□□□□□ -1.88
NDEL1-211ENST00000581679 CSNK1A1LQ8N752 337 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms