RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ARPC3O15145 178 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 TBX1O43435 398 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 AKR7A2O43488 359 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 H1F0P07305 194 aaKnown RBP10.27□□□□□ -0.77
SS18-219ENST00000581570 COX7A1P24310 79 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 SLC6A6P31641 620 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 SPIBQ01892 262 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 DCTN2Q13561 401 aaKnown RBP10.27□□□□□ -0.77
SS18-219ENST00000581570 TIGD6Q17RP2 521 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 FGD3Q5JSP0 725 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 Q6ZS46 218 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 LHFPL4Q7Z7J7 247 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 ZDHHC21Q8IVQ6 265 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 RPL3LQ92901 407 aaKnown RBP10.27□□□□□ -0.77
SS18-219ENST00000581570 MUC13Q9H3R2 512 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 KRCC1Q9NPI7 259 aaPredicted RBP10.27□□□□□ -0.77
SS18-219ENST00000581570 ABCB10Q9NRK6 738 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 INPP5EQ9NRR6 644 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 CENPMQ9NSP4 180 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 PITPNC1Q9UKF7 332 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 RAB21Q9UL25 225 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 ENPP4Q9Y6X5 453 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 U3KQK5 164 aa10.27□□□□□ -0.77
SS18-219ENST00000581570 BIRC6Q9NR09 4857 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 A0A1W2PRQ8 180 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 TCRBV4S1A1TA0A5B7 111 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 TVP23AA6NH52 213 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 OR2AT4A6NND4 320 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 SYNGR1O43759 233 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 ALDOBP05062 364 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 NHLRC4P0CG21 123 aaPredicted RBP10.26□□□□□ -0.77
SS18-219ENST00000581570 PYCR1P32322 319 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 BLCAPP62952 87 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 DGCR6Q14129 220 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 TMEM95Q3KNT9 176 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 COQ5Q5HYK3 327 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 AGBL2Q5U5Z8 902 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 CBLL1Q75N03 491 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 DCXRQ7Z4W1 244 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 DYNAPQ8N1N2 210 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 ZNRF1Q8ND25 227 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 SDR9C7Q8NEX9 313 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 TMEM185AQ8NFB2 350 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 OR5K1Q8NHB7 308 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 FANK1Q8TC84 345 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 RPS4Y2Q8TD47 263 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 DYDC1Q8WWB3 177 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 DPF1Q92782 380 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 SGK3Q96BR1 496 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 REEP6Q96HR9 211 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 HSH2DQ96JZ2 352 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 IFT27Q9BW83 186 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 RTL8AQ9BWD3 113 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 PAPOLGQ9BWT3 736 aaKnown RBP10.26□□□□□ -0.77
SS18-219ENST00000581570 OR52D1Q9H346 318 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 GID8Q9NWU2 228 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 NLKQ9UBE8 527 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 RHBDD3Q9Y3P4 386 aa10.26□□□□□ -0.77
SS18-219ENST00000581570 TSSC4Q9Y5U2 329 aaPredicted RBP10.26□□□□□ -0.77
SS18-219ENST00000581570 A0A1W2PPH5 198 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 FAM90A8PA6NJQ4 464 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 ANXA2P2A6NMY6 339 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 F2RL2O00254 374 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 RHBDL1O75783 438 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 CLIC3O95833 236 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 IL5RAQ01344 420 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 SEC23BQ15437 767 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 METTL21CQ5VZV1 264 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 RNF144BQ7Z419 303 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 CENPVQ7Z7K6 275 aaPredicted RBP10.25□□□□□ -0.77
SS18-219ENST00000581570 CSNK2A3Q8NEV1 391 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 SLAMF6Q96DU3 332 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 GPR61Q9BZJ8 451 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 C19orf12Q9NSK7 152 aa10.25□□□□□ -0.77
SS18-219ENST00000581570 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
SS18-219ENST00000581570 FAM32AQ9Y421 112 aaKnown RBP10.25□□□□□ -0.77
SS18-219ENST00000581570 IGKV1D-17A0A075B6S4 117 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 TRBV4-1A0A0J9YWV2 114 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 hCG_38984A0A1B0GV85 526 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 hCG_1809904A0A1W2PP81 198 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 A0A1W2PPE2 198 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 A0A1W2PR64 198 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 A0A1W2PRV1 198 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 TMEM210A6NLX4 147 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 BBIP1A8MTZ0 92 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 CXCR6O00574 342 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 IDH3BO43837 385 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 SERPINA1P01009 418 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 ANXA2P07355 339 aaKnown RBP10.24□□□□□ -0.77
SS18-219ENST00000581570 PSG2P11465 335 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 PSKH1P11801 424 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 GLRA1P23415 457 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 GSK3AP49840 483 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 CAPZA1P52907 286 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 SLC25A1P53007 311 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 ERVFRD-1P60508 538 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.24□□□□□ -0.77
SS18-219ENST00000581570 KLHL22Q53GT1 634 aa10.24□□□□□ -0.77
SS18-219ENST00000581570 TCTEX1D4Q5JR98 221 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms