RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ADAT1Q9BUB4 502 aaKnown RBP12.18□□□□□ -0.46
SKA2-205ENST00000580541 CHST5Q9GZS9 411 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 CXXC4Q9H2H0 198 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 TCF7L1Q9HCS4 588 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 MYEF2Q9P2K5 600 aaKnown RBP12.18□□□□□ -0.46
SKA2-205ENST00000580541 IL19Q9UHD0 177 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 FOXJ3Q9UPW0 622 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
SKA2-205ENST00000580541 ARFGEF3Q5TH69 2177 aa12.18□□□□□ -0.46
SKA2-205ENST00000580541 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 H7C417 338 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 GPX5O75715 221 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 TFAP2AP05549 437 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 CD55P08174 381 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 PSMD7P51665 324 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 FUT6P51993 359 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 PRSS12P56730 875 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 RPS25P62851 125 aaKnown RBP12.17□□□□□ -0.46
SKA2-205ENST00000580541 GNG3P63215 75 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 TNFAIP6P98066 277 aaPredicted RBP12.17□□□□□ -0.46
SKA2-205ENST00000580541 DOC2BQ14184 412 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 TESK1Q15569 626 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 HSD17B12Q53GQ0 312 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 CD200R1LQ6Q8B3 271 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 DNAAF1Q8NEP3 725 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 OR13F1Q8NGS4 319 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 OR10AC1Q8NH08 325 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 RGP1Q92546 391 aaPredicted RBP12.17□□□□□ -0.46
SKA2-205ENST00000580541 ERGIC1Q969X5 290 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 ADAT3Q96EY9 351 aaPredicted RBP12.17□□□□□ -0.46
SKA2-205ENST00000580541 RNF170Q96K19 258 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 DERL3Q96Q80 235 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 CACNG6Q9BXT2 260 aa12.17□□□□□ -0.46
SKA2-205ENST00000580541 EXOSC4Q9NPD3 245 aaKnown RBP12.17□□□□□ -0.46
SKA2-205ENST00000580541 TRBV5-7A0A0A0MS05 114 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 A6NIN4 97 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 IFNL4K9M1U5 179 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 GABRPO00591 440 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 SULT1B1O43704 296 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 IGHV1-46P01743 117 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 ATF1P18846 271 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 SRMP19623 302 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 FGF9P31371 208 aaPredicted RBP12.16□□□□□ -0.46
SKA2-205ENST00000580541 ALDH3B2P48448 385 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 ATP1B3P54709 279 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 FABP5Q01469 135 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 ZNF573Q86YE8 665 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 OR5P3Q8WZ94 311 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 NINJ1Q92982 152 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 BORCS8Q96FH0 119 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 BARX1Q9HBU1 254 aaPredicted RBP12.16□□□□□ -0.46
SKA2-205ENST00000580541 NOX4Q9NPH5 578 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 TMEM138Q9NPI0 162 aa12.16□□□□□ -0.46
SKA2-205ENST00000580541 RAI1Q7Z5J4 1906 aaPredicted RBP12.15□□□□□ -0.46
SKA2-205ENST00000580541 AKAP6Q13023 2319 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 ZSCAN5BA6NJL1 495 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 OVOL3O00110 214 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 PDCD5O14737 125 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 AIREO43918 545 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 SC5DO75845 299 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 ALDOBP05062 364 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 UCHL1P09936 223 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 FSTP19883 344 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 MYL9P24844 172 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 CD200P41217 278 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 CRYBB2P43320 205 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 RBP2P50120 134 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 CEP78Q5JTW2 689 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 HIST2H2BCQ6DN03 193 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 Q6ZR03 302 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 CDH26Q8IXH8 852 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 OR1M1Q8NGA1 313 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 OR13C5Q8NGS8 318 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 FOXRED1Q96CU9 486 aaPredicted RBP12.15□□□□□ -0.46
SKA2-205ENST00000580541 ITPKCQ96DU7 683 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 YIPF6Q96EC8 236 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 KCTD7Q96MP8 289 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 SAP30LQ9HAJ7 183 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 GPR173Q9NS66 373 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 SNTG1Q9NSN8 517 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
SKA2-205ENST00000580541 BOLA1Q9Y3E2 137 aa12.15□□□□□ -0.46
SKA2-205ENST00000580541 CACNA1DQ01668 2161 aa12.15□□□□□ -0.47
SKA2-205ENST00000580541 TRAV1-2A0A0B4J238 106 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 A0A1W2PPK0 400 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 ZNF732B4DXR9 585 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 LMX1BO60663 402 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 NOL3O60936 208 aaKnown RBP12.14□□□□□ -0.47
SKA2-205ENST00000580541 LILRA1O75019 489 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 CYB5AP00167 134 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 F12P00748 615 aaPredicted RBP12.14□□□□□ -0.47
SKA2-205ENST00000580541 HCKP08631 526 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 IRF2P14316 349 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 BDKRB2P30411 391 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 EFNA4P52798 201 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 MTCP1P56278 107 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 CCL8P80075 99 aa12.14□□□□□ -0.47
SKA2-205ENST00000580541 MRPS11P82912 194 aaKnown RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms