RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 TMEM269A0A1B0GVZ9 245 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 LOC110117498-PIK3R3F6TDL0 507 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 CLDN34H7C241 214 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 LIMS3P0CW19 117 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 LIMS4P0CW20 117 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 ETV1P50549 477 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 OR12D2P58182 307 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 SLC35A2P78381 396 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 MALLQ13021 153 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 NKPD1Q17RQ9 610 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 SNAI3Q3KNW1 292 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 COLCA1Q6ZS62 124 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 KCTD20Q7Z5Y7 419 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 SYS1Q8N2H4 156 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 OR2J1Q9GZK6 312 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 POFUT1Q9H488 388 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 MOB1AQ9H8S9 216 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 STARD10Q9Y365 291 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 MMP24Q9Y5R2 645 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 R4GMQ9 66 aa16.25■□□□□ 0.19
LIMD2-209ENST00000580222 TRAPPC2LH3BP13 241 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 MYL12BO14950 172 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 XRCC2O43543 280 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 RGS10O43665 173 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 C21orf33P30042 268 aaPredicted RBP16.24■□□□□ 0.19
LIMD2-209ENST00000580222 MFGE8Q08431 387 aaPredicted RBP16.24■□□□□ 0.19
LIMD2-209ENST00000580222 GFOD2Q3B7J2 385 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 ZNF718Q3SXZ3 478 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 TMPRSS11AQ6ZMR5 421 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 SGCDQ92629 289 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 ZNF649Q9BS31 505 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 CCDC90BQ9GZT6 254 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 MMP27Q9H306 513 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 FAM206AQ9NX38 181 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 ERVK-18Q9QC07 812 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 LRCH1Q9Y2L9 728 aa16.24■□□□□ 0.19
LIMD2-209ENST00000580222 CAB39Q9Y376 341 aaPredicted RBP16.24■□□□□ 0.19
LIMD2-209ENST00000580222 MT-ND5P03915 603 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 TUBG1P23258 451 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 ANOS1P23352 680 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 PSMB10P40306 273 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 GABARAPL2P60520 117 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 TIGD6Q17RP2 521 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 GLYATL3Q5SZD4 288 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 BCL2L15Q5TBC7 163 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 OR2G6Q5TZ20 316 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 OR8B12Q8NGG6 310 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 OR52H1Q8NGJ2 320 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 OR2AE1Q8NHA4 323 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 SYNPRQ8TBG9 265 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 SPRYD4Q8WW59 207 aaPredicted RBP16.23■□□□□ 0.19
LIMD2-209ENST00000580222 CITED1Q99966 193 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 YTHDF1Q9BYJ9 559 aaKnown RBP16.23■□□□□ 0.19
LIMD2-209ENST00000580222 OR10A2Q9H208 303 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 DUSP21Q9H596 190 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 ISG20L2Q9H9L3 353 aaKnown RBP16.23■□□□□ 0.19
LIMD2-209ENST00000580222 TUBG2Q9NRH3 451 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 CLEC2DQ9UHP7 191 aa16.23■□□□□ 0.19
LIMD2-209ENST00000580222 IGLV3-9A0A075B6K5 115 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 IGHV3OR16-10A0A075B7F0 116 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 C5orf63A6NC05 138 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 ACOD1A6NK06 481 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 CLDN25C9JDP6 229 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 H3BSA7 217 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 SRSF10O75494 262 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MT-ND2P03891 347 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 HTR1AP08908 422 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MPV17P39210 176 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MMP16P51512 607 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 TSTQ16762 297 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 ARMCX4Q5H9R4 360 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 PRSS45Q7RTY3 260 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MRPL21Q7Z2W9 205 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 OR52N1Q8NH53 320 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 KLF14Q8TD94 323 aaPredicted RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 PELI1Q96FA3 418 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MARS2Q96GW9 593 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 SIGLEC11Q96RL6 698 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 GAL3ST1Q99999 423 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 PBOV1Q9GZY1 135 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 NKIRAS2Q9NYR9 191 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 NUFIP1Q9UHK0 495 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 PURGQ9UJV8 347 aaKnown RBP16.22■□□□□ 0.19
LIMD2-209ENST00000580222 OR52A1Q9UKL2 312 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 ERGIC3Q9Y282 383 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 SNX5Q9Y5X3 404 aa16.22■□□□□ 0.19
LIMD2-209ENST00000580222 MDFIC2A0A1B0GVS7 189 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 KNG1P01042 644 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 GBX2P52951 348 aaPredicted RBP16.21■□□□□ 0.19
LIMD2-209ENST00000580222 KLF3P57682 345 aaPredicted RBP16.21■□□□□ 0.19
LIMD2-209ENST00000580222 SELENOVP59797 346 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 RELBQ01201 579 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 MRPL28Q13084 256 aaKnown RBP16.21■□□□□ 0.19
LIMD2-209ENST00000580222 ZNF154Q13106 437 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 MBNL2Q5VZF2 373 aaKnown RBP16.21■□□□□ 0.19
LIMD2-209ENST00000580222 ASPHD2Q6ICH7 369 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 C16orf87Q6PH81 154 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 PRSS48Q7RTY5 328 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 COMMD2Q86X83 199 aa16.21■□□□□ 0.19
LIMD2-209ENST00000580222 EGFL6Q8IUX8 553 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms