RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 GATA4P43694 442 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZNF154Q13106 437 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 ALKBH1Q13686 389 aaKnown RBP18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 C6orf141Q5SZD1 244 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 MOB3CQ70IA8 216 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 KLBQ86Z14 1044 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 C11orf53Q8IXP5 236 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZDHHC23Q8IYP9 409 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZFP41Q8N8Y5 198 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 OR51A4Q8NGJ6 313 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 OR5P3Q8WZ94 311 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 TMEM80Q96HE8 168 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 LPAR2Q9HBW0 351 aa18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 SIRT4Q9Y6E7 314 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP4-203ENST00000578516 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 SYT7O43581 403 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 PTBP3O95758 552 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 DCKP27707 260 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 CHN2P52757 468 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 RIPPLY1Q0D2K3 151 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 PLCXD3Q63HM9 321 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 FDX2Q6P4F2 183 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 DOK3Q7L591 496 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZNF540Q8NDQ6 660 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 OR1M1Q8NGA1 313 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 NPRL2Q8WTW4 380 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 RPL3LQ92901 407 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 FKBP14Q9NWM8 211 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 UBAP1Q9NZ09 502 aa18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 EXOSC1Q9Y3B2 195 aaKnown RBP18.24■□□□□ 0.51
CDC42EP4-203ENST00000578516 hCG_1807616A0A1W2PRN6 198 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 EFCAB10A6NFE3 127 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 PIPP12273 146 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 GPM6AP51674 278 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 LMO4P61968 165 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 Q6ZSR3 168 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 KCTD8Q6ZWB6 473 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 KCTD20Q7Z5Y7 419 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 CELF2-AS1Q8N7Q2 184 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 GATAD2BQ8WXI9 593 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 RGP1Q92546 391 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 RAB1CQ92928 201 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 MSI2Q96DH6 328 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 RNF170Q96K19 258 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 GAL3ST1Q99999 423 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 MICU1Q9BPX6 476 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 PDCD1LG2Q9BQ51 273 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 PLCXD1Q9NUJ7 323 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 ENPP5Q9UJA9 477 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 NOP16Q9Y3C1 178 aaKnown RBP18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 MPC1Q9Y5U8 109 aa18.23■□□□□ 0.51
CDC42EP4-203ENST00000578516 IRGMA1A4Y4 181 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 ANXA2P2A6NMY6 339 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 HEXAP06865 529 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 UBCP0CG48 685 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 MYL12AP19105 171 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 GMFBP60983 142 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 BTG1P62324 171 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 STX19Q8N4C7 294 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 KLHL36Q8N4N3 616 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 DEFB108BQ8NET1 73 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 TRMT10AQ8TBZ6 339 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 Q8TCH9 128 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 SEH1LQ96EE3 360 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 ADAT3Q96EY9 351 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 MRPL48Q96GC5 212 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 TIMD4Q96H15 378 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 RTL8AQ9BWD3 113 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 FN3KRPQ9HA64 309 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 C14orf119Q9NWQ9 140 aa18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 CNOT2Q9NZN8 540 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 CAB39Q9Y376 341 aaPredicted RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 ANK3Q12955 4377 aaKnown RBP18.22■□□□□ 0.51
CDC42EP4-203ENST00000578516 IGHV3OR15-7A0A075B7D8 119 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZNF732B4DXR9 585 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 PTGES3LE9PB15 166 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 RRP9O43818 475 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZFPL1O95159 310 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ATP6V1B1P15313 513 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 GBX2P52951 348 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 SEC61A1P61619 476 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 TMEM42Q69YG0 159 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 SFRP4Q6FHJ7 346 aaPredicted RBP18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZNF676Q8N7Q3 588 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ZNF485Q8NCK3 441 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 LRRC29Q8WV35 223 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 PLEKHA1Q9HB21 404 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 ERVK-18Q9QC07 812 aa18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 FN1P02751 2386 aaKnown RBP18.21■□□□□ 0.51
CDC42EP4-203ENST00000578516 SONP18583 2426 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 PNMA8CA0A1B0GUJ8 204 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 CDIPTO14735 213 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 CD5LO43866 347 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 MTRF1O75570 445 aaKnown RBP18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 NRASP01111 189 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 IGHV2-5P01817 119 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 TFF1P04155 84 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 HSPA13P48723 471 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 SLC3A1Q07837 685 aa18.2■□□□□ 0.5
CDC42EP4-203ENST00000578516 CDK5R1Q15078 307 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms