RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 CHRFAM7AQ494W8 412 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 FAM120AOSQ5T036 256 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 ZNF826PQ6ZT77 177 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 PRSS35Q8N3Z0 413 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 OR14K1Q8NGZ2 314 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 HPSE2Q8WWQ2 592 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 TMEM246Q9BRR3 403 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 ZNF649Q9BS31 505 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 RTL8AQ9BWD3 113 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 RNPEPL1Q9HAU8 725 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 ACOXLQ9NUZ1 547 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 HIF1ANQ9NWT6 349 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 GNG8Q9UK08 70 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 PCDHB10Q9UN67 800 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 MYRFQ9Y2G1 1151 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 RPL36Q9Y3U8 105 aaKnown RBP16.19■□□□□ 0.18
SS18-208ENST00000577751 NAV3Q8IVL0 2385 aa16.19■□□□□ 0.18
SS18-208ENST00000577751 DHRS7CA6NNS2 312 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 P2RY10O00398 339 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 FADS2O95864 444 aaKnown RBP16.18■□□□□ 0.18
SS18-208ENST00000577751 THBS2P35442 1172 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 CFHR2P36980 270 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 OR12D2P58182 307 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 HOXA4Q00056 320 aaPredicted RBP16.18■□□□□ 0.18
SS18-208ENST00000577751 SLC34A1Q06495 639 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 IL18R1Q13478 541 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 GALEQ14376 348 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 SMN1Q16637 294 aaKnown RBP16.18■□□□□ 0.18
SS18-208ENST00000577751 FDX2Q6P4F2 183 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 ZNF771Q7L3S4 317 aaPredicted RBP16.18■□□□□ 0.18
SS18-208ENST00000577751 FAM220AQ7Z4H9 259 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 EGFL6Q8IUX8 553 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 ZDHHC23Q8IYP9 409 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 GCSAMQ8N6F7 178 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 CYGBQ8WWM9 190 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 BEX2Q9BXY8 128 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 SHARPINQ9H0F6 387 aa16.18■□□□□ 0.18
SS18-208ENST00000577751 A6NLC8 198 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 TMEM210A6NLX4 147 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 H0YAE9 185 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 FAHP16930 419 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 PCMT1P22061 227 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 ZFP36P26651 326 aaKnown RBP16.17■□□□□ 0.18
SS18-208ENST00000577751 CEACAM21Q3KPI0 293 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 KRTAP21-3Q3LHN1 58 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 KLHL22Q53GT1 634 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 WDR38Q5JTN6 314 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 TMEM42Q69YG0 159 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 WDR82Q6UXN9 313 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 DOK3Q7L591 496 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 THAP5Q7Z6K1 395 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 SETD9Q8NE22 299 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 OR52I1Q8NGK6 324 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 RNF170Q96K19 258 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 ADI1Q9BV57 179 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 FGF20Q9NP95 211 aaPredicted RBP16.17■□□□□ 0.18
SS18-208ENST00000577751 INPP5EQ9NRR6 644 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 MIOXQ9UGB7 285 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 ENPP5Q9UJA9 477 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 PIGLQ9Y2B2 252 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 POLR3KQ9Y2Y1 108 aaPredicted RBP16.17■□□□□ 0.18
SS18-208ENST00000577751 HSPE1-MOB4S4R3N1 261 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 ARHGAP32A7KAX9 2087 aa16.17■□□□□ 0.18
SS18-208ENST00000577751 A8MXK9 166 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 LGALS8O00214 317 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 TNFRSF13BO14836 293 aaPredicted RBP16.16■□□□□ 0.18
SS18-208ENST00000577751 FOXH1O75593 365 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 CAPGP40121 348 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 PSMB10P40306 273 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 KIR3DL2P43630 455 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 SEC61A1P61619 476 aaKnown RBP16.16■□□□□ 0.18
SS18-208ENST00000577751 ACTA2P62736 377 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 ACTG2P63267 376 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 CSNK2BP67870 215 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 DCDC5Q6ZRR9 648 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 LHFPL3Q86UP9 236 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 PRIMA1Q86XR5 153 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 SYS1Q8N2H4 156 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 C19orf18Q8NEA5 215 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 OR5A2Q8NGI9 324 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 OR2G2Q8NGZ5 317 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 CNIH3Q8TBE1 160 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 PELI1Q96FA3 418 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 HIST1H2AAQ96QV6 131 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 MYCBPQ99417 103 aaPredicted RBP16.16■□□□□ 0.18
SS18-208ENST00000577751 JAM3Q9BX67 310 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 METTL17Q9H7H0 456 aaPredicted RBP16.16■□□□□ 0.18
SS18-208ENST00000577751 ERVK13-1Q9NX77 482 aa16.16■□□□□ 0.18
SS18-208ENST00000577751 PPIAL4CA0A0B4J2A2 164 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 KIAA1324LA8MWY0 1029 aaPredicted RBP16.15■□□□□ 0.18
SS18-208ENST00000577751 CDIPTO14735 213 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 FAM157CP0CG43 387 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 LCN2P80188 198 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 ODF4Q2M2E3 257 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 CEP78Q5JTW2 689 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 SFRP4Q6FHJ7 346 aaPredicted RBP16.15■□□□□ 0.18
SS18-208ENST00000577751 CCDC54Q8NEL0 328 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 DEFB108BQ8NET1 73 aa16.15■□□□□ 0.18
SS18-208ENST00000577751 MRPL48Q96GC5 212 aaKnown RBP16.15■□□□□ 0.18
SS18-208ENST00000577751 C4orf36Q96KX1 117 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms