RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 PPP1R14AQ96A00 147 aa8.79□□□□□ -1
SS18-207ENST00000577636 FGGYQ96C11 551 aa8.79□□□□□ -1
SS18-207ENST00000577636 S100A16Q96FQ6 103 aaKnown RBP8.79□□□□□ -1
SS18-207ENST00000577636 MIXL1Q9H2W2 232 aa8.79□□□□□ -1
SS18-207ENST00000577636 RGCCQ9H4X1 137 aa8.79□□□□□ -1
SS18-207ENST00000577636 GPR84Q9NQS5 396 aa8.79□□□□□ -1
SS18-207ENST00000577636 MALT1Q9UDY8 824 aa8.79□□□□□ -1
SS18-207ENST00000577636 STEAP1Q9UHE8 339 aa8.79□□□□□ -1
SS18-207ENST00000577636 SPATA2Q9UM82 520 aa8.79□□□□□ -1
SS18-207ENST00000577636 V9GYH0 126 aa8.79□□□□□ -1
SS18-207ENST00000577636 CUBNO60494 3623 aa8.78□□□□□ -1
SS18-207ENST00000577636 TRAV8-7A0A075B6U6 113 aa8.78□□□□□ -1
SS18-207ENST00000577636 A8MV72 311 aaPredicted RBP8.78□□□□□ -1
SS18-207ENST00000577636 LCATP04180 440 aa8.78□□□□□ -1
SS18-207ENST00000577636 SLC2A1P11166 492 aa8.78□□□□□ -1
SS18-207ENST00000577636 CD79AP11912 226 aa8.78□□□□□ -1
SS18-207ENST00000577636 SNRPBP14678 240 aaKnown RBP8.78□□□□□ -1
SS18-207ENST00000577636 ATF1P18846 271 aa8.78□□□□□ -1
SS18-207ENST00000577636 ELK1P19419 428 aa8.78□□□□□ -1
SS18-207ENST00000577636 AZGP1P25311 298 aaKnown RBP8.78□□□□□ -1
SS18-207ENST00000577636 OTX1P32242 354 aaPredicted RBP8.78□□□□□ -1
SS18-207ENST00000577636 NR4A2P43354 598 aa8.78□□□□□ -1
SS18-207ENST00000577636 MAGEB1P43366 347 aa8.78□□□□□ -1
SS18-207ENST00000577636 PITPNBP48739 271 aa8.78□□□□□ -1
SS18-207ENST00000577636 PSG4Q00888 419 aa8.78□□□□□ -1
SS18-207ENST00000577636 C9orf135Q5VTT2 229 aa8.78□□□□□ -1
SS18-207ENST00000577636 PYHIN1Q6K0P9 492 aa8.78□□□□□ -1
SS18-207ENST00000577636 LINGO2Q7L985 606 aa8.78□□□□□ -1
SS18-207ENST00000577636 NR2C2APQ86WQ0 139 aa8.78□□□□□ -1
SS18-207ENST00000577636 JAGN1Q8N5M9 183 aa8.78□□□□□ -1
SS18-207ENST00000577636 OR1M1Q8NGA1 313 aa8.78□□□□□ -1
SS18-207ENST00000577636 OR6M1Q8NGM8 313 aa8.78□□□□□ -1
SS18-207ENST00000577636 OR6K3Q8NGY3 331 aa8.78□□□□□ -1
SS18-207ENST00000577636 SETD6Q8TBK2 473 aa8.78□□□□□ -1
SS18-207ENST00000577636 LGALS14Q8TCE9 139 aa8.78□□□□□ -1
SS18-207ENST00000577636 IGFBPL1Q8WX77 278 aa8.78□□□□□ -1
SS18-207ENST00000577636 RAB40AQ8WXH6 277 aa8.78□□□□□ -1
SS18-207ENST00000577636 C10orf35Q96D05 121 aa8.78□□□□□ -1
SS18-207ENST00000577636 ORAI1Q96D31 301 aa8.78□□□□□ -1
SS18-207ENST00000577636 CPNE2Q96FN4 548 aaPredicted RBP8.78□□□□□ -1
SS18-207ENST00000577636 FAM71F1Q96KD3 344 aaPredicted RBP8.78□□□□□ -1
SS18-207ENST00000577636 SORCS2Q96PQ0 1159 aa8.78□□□□□ -1
SS18-207ENST00000577636 ACTR6Q9GZN1 396 aa8.78□□□□□ -1
SS18-207ENST00000577636 LIN7BQ9HAP6 207 aa8.78□□□□□ -1
SS18-207ENST00000577636 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
SS18-207ENST00000577636 CYSLTR2Q9NS75 346 aa8.78□□□□□ -1
SS18-207ENST00000577636 TAS2R4Q9NYW5 299 aa8.78□□□□□ -1
SS18-207ENST00000577636 ANK3Q12955 4377 aaKnown RBP8.77□□□□□ -1
SS18-207ENST00000577636 A0A096LPE4 126 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 A0A1W2PPZ6 126 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 SLC17A2O00624 439 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 XRCC2O43543 280 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 SYNGR3O43761 229 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 NDUFS7O75251 213 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 SOD3P08294 240 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 COX5BP10606 129 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 PPP3CBP16298 524 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 CCL1P22362 96 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 HTR2CP28335 458 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 BDKRB2P30411 391 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 THBS2P35442 1172 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 UBE2NP61088 152 aaKnown RBP8.77□□□□□ -1.01
SS18-207ENST00000577636 MALLQ13021 153 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 TSC22D1Q15714 1073 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 PABPC1L2AQ5JQF8 200 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 Q8N402 240 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 POC5Q8NA72 575 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 AKR7LQ8NHP1 331 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 CHPT1Q8WUD6 406 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 PP6455Q8WZ26 134 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 NEUROG1Q92886 237 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 SRRQ9GZT4 340 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 WNT5BQ9H1J7 359 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 SLC17A5Q9NRA2 495 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 PLSCR4Q9NRQ2 329 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 PRSS50Q9UI38 385 aa8.77□□□□□ -1.01
SS18-207ENST00000577636 ROS1P08922 2347 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 ATRQ13535 2644 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 A0A1B0GTI1 187 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 LOC390937A0A1W2PQ73 354 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 CIB4A0PJX0 185 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 DHRS7CA6NNS2 312 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 SULT1B1O43704 296 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 DHRS3O75911 302 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 PTTG1O95997 202 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 PAHP00439 452 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 EIF4EP06730 217 aaKnown RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 MMP7P09237 267 aaPredicted RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 IL7P13232 177 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 HOXB1P14653 301 aaPredicted RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 ARSBP15848 533 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 IGFBP3P17936 291 aaPredicted RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 ADRA2CP18825 462 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 CFPP27918 469 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 APLNRP35414 380 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 THBS4P35443 961 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 DDOSTP39656 456 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 RAB1AP62820 205 aa8.76□□□□□ -1.01
SS18-207ENST00000577636 SRSF2Q01130 221 aaKnown RBP8.76□□□□□ -1.01
SS18-207ENST00000577636 SPOCK1Q08629 439 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms