RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PRG3Q9Y2Y8 225 aaPredicted RBP1.56□□□□□ -2.16
COPS3-213ENST00000577210 OR51B2Q9Y5P1 312 aa1.56□□□□□ -2.16
COPS3-213ENST00000577210 TSSC4Q9Y5U2 329 aaPredicted RBP1.56□□□□□ -2.16
COPS3-213ENST00000577210 PALLDQ8WX93 1383 aa1.56□□□□□ -2.16
COPS3-213ENST00000577210 ZNF608Q9ULD9 1512 aaPredicted RBP1.56□□□□□ -2.16
COPS3-213ENST00000577210 DENND4AQ7Z401 1863 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 IGKV1-27A0A075B6S5 117 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 A0A0A6YYD5 115 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 IGHV2OR16-5A0A0B4J2B6 119 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 IGHV1-69DA0A0B4J2H0 117 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 IGKV6-21A0A0C4DH24 114 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 IGHV5-10-1A0A0J9YXX1 117 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 ISPDA4D126 451 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 C5orf63A6NC05 138 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 LINC01619G3V211 115 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MANBAO00462 879 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 RAD51BO15315 384 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 CTNSO60931 367 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SCN2BO60939 215 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 ALOX12BO75342 701 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 FOXH1O75593 365 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SERPINB7O75635 380 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 RCBTB2O95199 551 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 YEATS4O95619 227 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 CST4P01036 141 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 PTHP01270 115 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MRPL3P09001 348 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 SLC35G6P0C7Q6 338 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 GFAPP14136 432 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 DTYMKP23919 212 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MAGEA3P43357 314 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MAGEA6P43360 314 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 DNASE1L1P49184 302 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 RGS6P49758 472 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MLF1P58340 268 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 TPM4P67936 248 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 C2orf54Q08AI8 447 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 PMS2P3Q13401 168 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MADCAM1Q13477 382 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 COTL1Q14019 142 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 PTGES3Q15185 160 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 SYCP1Q15431 976 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 OR1Q1Q15612 314 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 PDPK2PQ6A1A2 396 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 KDM4DQ6B0I6 523 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 COPS6Q7L5N1 327 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MDP1Q86V88 176 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 LRRC6Q86X45 466 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 NELFCDQ8IXH7 590 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 BOD1L2Q8IYS8 172 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SLC7A5P1Q8MH63 180 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 ZNF645Q8N7E2 425 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 CYB561A3Q8NBI2 242 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 OR10Z1Q8NGY1 313 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 OR5W2Q8NH69 310 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 CLHC1Q8NHS4 586 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 RXFP4Q8TDU9 374 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 PDCD6IPQ8WUM4 868 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 IFT81Q8WYA0 676 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 GTF2H4Q92759 462 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 C18orf15Q96N68 181 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 ZFP3Q96NJ6 502 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 RDH12Q96NR8 316 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SERPINB11Q96P15 392 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 TRNT1Q96Q11 434 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 CAMK2N2Q96S95 79 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 CYTH2Q99418 400 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 VAT1Q99536 393 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 C20orf144Q9BQM9 153 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SULT4A1Q9BR01 284 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 LLPHQ9BRT6 129 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 CHAC1Q9BUX1 264 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 C1orf198Q9H425 327 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 SAV1Q9H4B6 383 aaPredicted RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 C12orf10Q9HB07 376 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 MS4A12Q9NXJ0 267 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 STX18Q9P2W9 335 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 RAB23Q9ULC3 237 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 FARSAQ9Y285 508 aaKnown RBP1.55□□□□□ -2.16
COPS3-213ENST00000577210 KLF12Q9Y4X4 402 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 WIF1Q9Y5W5 379 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 AK9Q5TCS8 1911 aa1.55□□□□□ -2.16
COPS3-213ENST00000577210 LTBP1Q14766 1721 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 TRAV8-4A0A0B4J246 113 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 TRAV40A0A0B4J280 105 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 A0A1B0GVX0 72 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 SLC5A10A0PJK1 596 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 J3QT63 122 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 SULT1C2O00338 296 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 TOR1AO14656 332 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 MYL12BO14950 172 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 REM1O75628 298 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 UPK1BO75841 260 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 BRI3O95415 125 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 TTC4O95801 387 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 P01737 135 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 TPM3P06753 285 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 ZNF806P0C7X5 589 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 ZNF823P16415 610 aa1.54□□□□□ -2.16
COPS3-213ENST00000577210 HTR1DP28221 377 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms