RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 PHF21AQ96BD5 680 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 R3HDM4Q96D70 268 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 GAFA1Q96PS6 74 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 RAB3IPQ96QF0 476 aaPredicted RBP9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 ABCB9Q9NP78 766 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 SNTG1Q9NSN8 517 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 CD300AQ9UGN4 299 aa9.48□□□□□ -0.89
CTDNEP1-212ENST00000576613 COL7A1Q02388 2944 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 NOTCH3Q9UM47 2321 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 TRBV23-1A0A0A0MS06 115 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 hCG_38984A0A1B0GV85 526 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 TMEM210A6NLX4 147 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 SIGLEC5O15389 551 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 PEX14O75381 377 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 GLCEO94923 617 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 PSKH1P11801 424 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 GSK3AP49840 483 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 TSPAN31Q12999 210 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 DGUOKQ16854 277 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 GFOD2Q3B7J2 385 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 CRIP3Q6Q6R5 217 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 LYPD4Q6UWN0 246 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 OR51L1Q8NGJ5 315 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 ANGPTL6Q8NI99 470 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 C17orf50Q8WW18 174 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 SGK3Q96BR1 496 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 NKX3-1Q99801 234 aaPredicted RBP9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 WDR13Q9H1Z4 485 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 MMP28Q9H239 520 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 EFCAB1Q9HAE3 211 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 DCAF13Q9NV06 445 aaKnown RBP9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 FGFR1OP2Q9NVK5 253 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 MPC1Q9Y5U8 109 aa9.47□□□□□ -0.89
CTDNEP1-212ENST00000576613 A0A1W2PPH5 198 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR2AT4A6NND4 320 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF593O00488 134 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 CHST1O43916 411 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 ACAA1P09110 424 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 COX4I1P13073 169 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 GSSP48637 474 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 NUDT2P50583 147 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 BLVRAP53004 296 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 LGALS4P56470 323 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 MXRA7P84157 204 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 TEX30Q5JUR7 227 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 GLYATQ6IB77 296 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 C8orf82Q6P1X6 216 aaPredicted RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 HACD2Q6Y1H2 254 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 KCTD8Q6ZWB6 473 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAM185AQ8N0U4 392 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 PAPD5Q8NDF8 572 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 TMEM185AQ8NFB2 350 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 GNPDA2Q8TDQ7 276 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNRF4Q8WWF5 429 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 RPL3LQ92901 407 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 MCUR1Q96AQ8 359 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR10A2Q9H208 303 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 RGCCQ9H4X1 137 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 HEXA-AS1Q9H8Q6 139 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 NLKQ9UBE8 527 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 RHBDD3Q9Y3P4 386 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 CDH10Q9Y6N8 788 aa9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 KMT2CQ8NEZ4 4911 aaKnown RBP9.46□□□□□ -0.9
CTDNEP1-212ENST00000576613 hCG_1809904A0A1W2PP81 198 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 A0A1W2PPE2 198 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 A0A1W2PR64 198 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 A0A1W2PRV1 198 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 DHRS12A0PJE2 317 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 AKR7A2O43488 359 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 CD28P10747 220 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAHP16930 419 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 CD33P20138 364 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 GABRA2P47869 451 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 BMXP51813 675 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF121P58317 390 aaPredicted RBP9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 PRDX4Q13162 271 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 EIF2B1Q14232 305 aaKnown RBP9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZBTB37Q5TC79 503 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 FOXB2Q5VYV0 432 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 HCP5Q6MZN7 132 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 FAM57BQ71RH2 274 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 SLC37A3Q8NCC5 494 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR6K6Q8NGW6 343 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 OR5P3Q8WZ94 311 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 DDOQ99489 341 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 CDCA4Q9BXL8 241 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 EGLN3Q9H6Z9 239 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 PPP1R3EQ9H7J1 279 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 SPAG4Q9NPE6 437 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 SERTAD4Q9NUC0 356 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 ABCD2Q9UBJ2 740 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 LRP12Q9Y561 859 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 V9GYQ6 96 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 TENM3Q9P273 2699 aa9.45□□□□□ -0.9
CTDNEP1-212ENST00000576613 ZNF850A8MQ14 1090 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 MPIG6BO95866 241 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 TFF1P04155 84 aa9.44□□□□□ -0.9
CTDNEP1-212ENST00000576613 GYPBP06028 91 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms