RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 IL2RGP31785 369 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 KIR3DL2P43630 455 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF81P51508 661 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 GRB2P62993 217 aaKnown RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 ROM1Q03395 351 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 EGR3Q06889 387 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF846Q147U1 533 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 PRAMEF6Q5VXH4 476 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 C22orf42Q6IC83 251 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 RPL22L1Q6P5R6 122 aaKnown RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 DRAM2Q6UX65 266 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 UNQ9370/PRO34162Q6UXP9 181 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 Q71RC1 249 aaPredicted RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 KRT77Q7Z794 578 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 CCDC190Q86UF4 302 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 LRRC75A-AS1Q8N1F1 130 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 MS4A15Q8N5U1 240 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 OR2Z1Q8NG97 314 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 OR56B2PQ8NGI1 322 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 TMEM203Q969S6 136 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 SGK3Q96BR1 496 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 MRPL48Q96GC5 212 aaKnown RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 REEP6Q96HR9 211 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 WDFY2Q96P53 400 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 HMG20AQ9NP66 347 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 EXOSC4Q9NPD3 245 aaKnown RBP6.71□□□□□ -1.34
CCDC40-215ENST00000576033 DLL4Q9NR61 685 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 GPR160Q9UJ42 338 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 GSTK1Q9Y2Q3 226 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 PEX16Q9Y5Y5 336 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 TMEM14AQ9Y6G1 99 aa6.71□□□□□ -1.34
CCDC40-215ENST00000576033 DYSFO75923 2080 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 YLPM1P49750 1951 aaKnown RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 IGHV4-61A0A0C4DH41 118 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PNMA8CA0A1B0GUJ8 204 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 LRP5LA4QPB2 252 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ANKRD61A6NGH8 418 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 J3QLW9 94 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 P2RY10O00398 339 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 TMCC2O75069 709 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 RP2O75695 350 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 CDRT1O95170 752 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF205O95201 554 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 F12P00748 615 aaPredicted RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 CLEC2LP0C7M8 214 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF19P17023 458 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 KITLGP21583 273 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 CA6P23280 308 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 CD40LGP29965 261 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 SDC2P34741 201 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 SOX6P35712 828 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 MTNR1BP49286 362 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 RORCP51449 518 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 EFNA4P52798 201 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 GBX2P52951 348 aaPredicted RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 NANOS3P60323 173 aaKnown RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 FAM3AP98173 230 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 KRTAP1-1Q07627 177 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ECH1Q13011 328 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 INSL4Q14641 139 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 AVPI1Q5T686 147 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ARL9Q6T311 187 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 FBXW12Q6X9E4 464 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 MRPL21Q7Z2W9 205 aaKnown RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 WDR86Q86TI4 376 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PRSS35Q8N3Z0 413 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF454Q8N9F8 522 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 C19orf18Q8NEA5 215 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 OR10AC1Q8NH08 325 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 OR51E1Q8TCB6 317 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 SNX33Q8WV41 574 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ITLN1Q8WWA0 313 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ASB17Q8WXJ9 295 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PHYHIPQ92561 330 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 HAVCR1Q96D42 359 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ELMOD3Q96FG2 381 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PGAM5Q96HS1 289 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 FAM71F1Q96KD3 344 aaPredicted RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 TMED9Q9BVK6 235 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 BPESC1Q9GZL8 116 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PBOV1Q9GZY1 135 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 PPIL3Q9H2H8 161 aaKnown RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ZCCHC4Q9H5U6 513 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 SMURF1Q9HCE7 757 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 G6PC2Q9NQR9 355 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 ZNF275Q9NSD4 429 aaPredicted RBP6.7□□□□□ -1.34
CCDC40-215ENST00000576033 GNG8Q9UK08 70 aa6.7□□□□□ -1.34
CCDC40-215ENST00000576033 TRAV1-2A0A0B4J238 106 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 A0A0G2JK05 382 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 TRBV5-5A0A0J9YX44 114 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 CD300LBA8K4G0 201 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 IQCF6A8MYZ5 107 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 TPD52L2O43399 206 aaKnown RBP6.69□□□□□ -1.34
CCDC40-215ENST00000576033 GATBO75879 557 aaKnown RBP6.69□□□□□ -1.34
CCDC40-215ENST00000576033 TTRP02766 147 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 UCHL1P09936 223 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 RAC2P15153 192 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 CFL1P23528 166 aaKnown RBP6.69□□□□□ -1.34
CCDC40-215ENST00000576033 EVX1P49640 407 aa6.69□□□□□ -1.34
CCDC40-215ENST00000576033 GSK3AP49840 483 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms