RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 ACOT13Q9NPJ3 140 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 MRPL15Q9P015 296 aaKnown RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 CLEC2DQ9UHP7 191 aa11.17□□□□□ -0.62
RPAIN-216ENST00000575599 CAB39Q9Y376 341 aaPredicted RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 NOP16Q9Y3C1 178 aaKnown RBP11.17□□□□□ -0.62
RPAIN-216ENST00000575599 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.17□□□□□ -0.621e-8■■■□□ 16.6
RPAIN-216ENST00000575599 hCG_38984A0A1B0GV85 526 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ANKRD30BLA7E2S9 258 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 TMEM178BH3BS89 294 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 IGHV2-70P01814 119 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 IGHV2-5P01817 119 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 HTR1AP08908 422 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 SMIM18P0DKX4 95 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 CFL1P23528 166 aaKnown RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 PSMB9P28065 219 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GBX2P52951 348 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 WNT4P56705 351 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 BTG1P62324 171 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF85Q03923 595 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 EGR3Q06889 387 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 MAB21L1Q13394 359 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 IRF3Q14653 427 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF367Q7RTV3 350 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 KCTD20Q7Z5Y7 419 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GLCCI1Q86VQ1 547 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 NANOGP1Q8N7R0 232 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 YIPF7Q8N8F6 280 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR52N1Q8NH53 320 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR51F2Q8NH61 342 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 C1orf159Q96HA4 380 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 BEX2Q9BXY8 128 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 RGCCQ9H4X1 137 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 UFSP2Q9NUQ7 469 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 TMEM160Q9NX00 188 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GNG8Q9UK08 70 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 CDC42EP3Q9UKI2 254 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 NAV3Q8IVL0 2385 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 TMEM269A0A1B0GVZ9 245 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 METTL15A6NJ78 407 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 LRRC30A6NM36 301 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 MAGEB4O15481 346 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GMDSO60547 372 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF205O95201 554 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 MSMBP08118 114 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 LIMS3P0CW19 117 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 LIMS4P0CW20 117 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 IRF2P14316 349 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 DDOSTP39656 456 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 CD200P41217 278 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 RPL5P46777 297 aaKnown RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GSK3AP49840 483 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 RIDAP52758 137 aaKnown RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ROM1Q03395 351 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZMYND11Q15326 602 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 SPHARQ15513 63 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 CR1LQ2VPA4 569 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF829Q3KNS6 432 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 FAM120AOSQ5T036 256 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR2G6Q5TZ20 316 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 DEGS2Q6QHC5 323 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 COMMD2Q86X83 199 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 ZNF679Q8IYX0 411 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 OR8S1Q8NH09 359 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GATAD2BQ8WXI9 593 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 TMEM186Q96B77 213 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 C4orf36Q96KX1 117 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 PAPOLGQ9BWT3 736 aaKnown RBP11.16□□□□□ -0.62
RPAIN-216ENST00000575599 FAM206AQ9NX38 181 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 LPAR3Q9UBY5 353 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 PCDHB10Q9UN67 800 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 GTF2A1LQ9UNN4 478 aa11.16□□□□□ -0.62
RPAIN-216ENST00000575599 SVEP1Q4LDE5 3571 aa11.15□□□□□ -0.62
RPAIN-216ENST00000575599 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-216ENST00000575599 IFNL4K9M1U5 179 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 ZNF254O75437 659 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 SULT1C4O75897 302 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 HNF1AP20823 631 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 PCMT1P22061 227 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 GNALP38405 381 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 PMELP40967 661 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 GATA4P43694 442 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-216ENST00000575599 TAS2R43P59537 309 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 GUCA2AQ02747 115 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 MFGE8Q08431 387 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-216ENST00000575599 MRPL28Q13084 256 aaKnown RBP11.15□□□□□ -0.63
RPAIN-216ENST00000575599 MPPED2Q15777 294 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 CDONQ4KMG0 1287 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 TP53I3Q53FA7 332 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 FAM201AQ5SY85 155 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 SSX6Q7RTT6 188 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 PRIMA1Q86XR5 153 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 KLBQ86Z14 1044 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 EGFL6Q8IUX8 553 aa11.15□□□□□ -0.63
RPAIN-216ENST00000575599 C1orf87Q8N0U7 546 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms