RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.59	□□□□□ -0.23
PKM-223	ENST00000569050	TCRBV4S1A1T	A0A5B7	111 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	NKX6-3	A6NJ46	265 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050		B2RBV5	119 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	NCK1	P16333	377 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	PAICS	P22234	425 aa	Known RBP	13.58	□□□□□ -0.24
PKM-223	ENST00000569050	CALB2	P22676	271 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	LMO1	P25800	156 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	POU1F1	P28069	291 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	YAP1	P46937	504 aa	Known RBP	13.58	□□□□□ -0.24
PKM-223	ENST00000569050	CBX1	P83916	185 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	GPR139	Q6DWJ6	353 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	TBPL2	Q6SJ96	375 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	LHFPL4	Q7Z7J7	247 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	ADCK1	Q86TW2	530 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	OFCC1	Q8IZS5	231 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	MYDGF	Q969H8	173 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	GPR61	Q9BZJ8	451 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	AP3M1	Q9Y2T2	418 aa		13.58	□□□□□ -0.24
PKM-223	ENST00000569050	CSMD3	Q7Z407	3707 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050		A0A087WUU8	490 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050		J3KTA2	159 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	CXCR6	O00574	342 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	SIGLEC5	O15389	551 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	CAV3	P56539	151 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	TMPRSS11F	Q6ZWK6	438 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	FAM185A	Q8N0U4	392 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	SDR9C7	Q8NEX9	313 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	FAM162A	Q96A26	154 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	RAB3IP	Q96QF0	476 aa	Predicted RBP	13.57	□□□□□ -0.24
PKM-223	ENST00000569050	GPX7	Q96SL4	187 aa	Predicted RBP	13.57	□□□□□ -0.24
PKM-223	ENST00000569050	CYB5R1	Q9UHQ9	305 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	B9D1	Q9UPM9	204 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	IER3IP1	Q9Y5U9	82 aa		13.57	□□□□□ -0.24
PKM-223	ENST00000569050	CDIPT	O14735	213 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	FFAR1	O14842	300 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	NDUFB2	O95178	105 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	CLIC3	O95833	236 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	ALDOB	P05062	364 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	T-ENOL	P0DO92	83 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	COX7A1	P24310	79 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	CRABP1	P29762	137 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	NAA10	P41227	235 aa	Predicted RBP	13.56	□□□□□ -0.24
PKM-223	ENST00000569050	MNAT1	P51948	309 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	TRAM2	Q15035	370 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	CYBRD1	Q53TN4	286 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	DNM1P34	Q6PK57	102 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	ZNF730	Q6ZMV8	503 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	MBOAT2	Q6ZWT7	520 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	MRPL41	Q8IXM3	137 aa	Known RBP	13.56	□□□□□ -0.24
PKM-223	ENST00000569050	OR6V1	Q8N148	313 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	ANGPTL6	Q8NI99	470 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	TPD52L3	Q96J77	140 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	CDRT15	Q96T59	188 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	ASCL2	Q99929	193 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	NDEL1	Q9GZM8	345 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	TLNRD1	Q9H1K6	362 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	PPP1R3E	Q9H7J1	279 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	NDE1	Q9NXR1	346 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	SNX13	Q9Y5W8	968 aa		13.56	□□□□□ -0.24
PKM-223	ENST00000569050	FAM90A8P	A6NJQ4	464 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	PTP4A3	O75365	173 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	ZFPL1	O95159	310 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	ZNF682	O95780	498 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	OTX1	P32242	354 aa	Predicted RBP	13.55	□□□□□ -0.24
PKM-223	ENST00000569050	IFNA8	P32881	189 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	LGALS4	P56470	323 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	FXYD6P3	P58550	94 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	ETV3L	Q6ZN32	361 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	RNF113B	Q8IZP6	322 aa	Known RBP	13.55	□□□□□ -0.24
PKM-223	ENST00000569050	OR2AJ1	Q8NGZ0	328 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	RPS4Y2	Q8TD47	263 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	SPTSSA	Q969W0	71 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	MED30	Q96HR3	178 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	FNDC11	Q9BVV2	318 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	HEXA-AS1	Q9H8Q6	139 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	SRA1	Q9HD15	236 aa	Known RBP	13.55	□□□□□ -0.24
PKM-223	ENST00000569050	SIGLEC7	Q9Y286	467 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	LSM4	Q9Y4Z0	139 aa	Known RBP	13.55	□□□□□ -0.24
PKM-223	ENST00000569050		V9GYQ6	96 aa		13.55	□□□□□ -0.24
PKM-223	ENST00000569050	ANKRD30BL	A7E2S9	258 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050		H0YHG0	523 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	F2RL2	O00254	374 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	TIPRL	O75663	272 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	TXNDC12	O95881	172 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	SERPINA1	P01009	418 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	ACAA1	P09110	424 aa	Predicted RBP	13.54	□□□□□ -0.24
PKM-223	ENST00000569050	SLC2A1	P11166	492 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	KDELR2	P33947	212 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	SAMD4B	Q5PRF9	694 aa	Known RBP	13.54	□□□□□ -0.24
PKM-223	ENST00000569050	C11orf42	Q8N5U0	333 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	FAM46A	Q96IP4	442 aa	Known RBP	13.54	□□□□□ -0.24
PKM-223	ENST00000569050	ABCB10	Q9NRK6	738 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	C19orf12	Q9NSK7	152 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	PITPNC1	Q9UKF7	332 aa		13.54	□□□□□ -0.24
PKM-223	ENST00000569050	GLCE	O94923	617 aa		13.53	□□□□□ -0.24
PKM-223	ENST00000569050	IFNA14	P01570	189 aa		13.53	□□□□□ -0.24
PKM-223	ENST00000569050	ERVFRD-1	P60508	538 aa		13.53	□□□□□ -0.24
PKM-223	ENST00000569050	DGCR2	P98153	550 aa		13.53	□□□□□ -0.24
PKM-223	ENST00000569050	SLC36A3	Q495N2	470 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms