RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 REEP6Q96HR9 211 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 BOD1Q96IK1 185 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 TAAR6Q96RI8 345 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 ATG5Q9H1Y0 275 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 CNTD2Q9H8S5 307 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 SCPEP1Q9HB40 452 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 DCHS2Q6V1P9 2916 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 POLEQ07864 2286 aa12.69□□□□□ -0.38
COMMD4-221ENST00000567935 MED12LQ86YW9 2145 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 CIB4A0PJX0 185 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 J3QW42 95 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 ORC5O43913 435 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 HCKP08631 526 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 HOXD4P09016 255 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 FAM157BP0CG42 384 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 SLC6A1P30531 599 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 GDNFP39905 211 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 KIR2DL3P43628 341 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 PER3P56645 1201 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 KLF9Q13886 244 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 CNN3Q15417 329 aaKnown RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 ACSF3Q4G176 576 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 SFRP5Q5T4F7 317 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 KRT74Q7RTS7 529 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 C1orf162Q8NEQ5 155 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 OR4D6Q8NGJ1 314 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 BCL2L2Q92843 193 aaPredicted RBP12.68□□□□□ -0.38
COMMD4-221ENST00000567935 FAM46BQ96A09 425 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 CREB3L1Q96BA8 519 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 NEDD4LQ96PU5 975 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 DPAGT1Q9H3H5 408 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 C12orf49Q9H741 205 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 ZNF224Q9NZL3 707 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 PRSS50Q9UI38 385 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 PIGLQ9Y2B2 252 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 TACC2O95359 2948 aa12.68□□□□□ -0.38
COMMD4-221ENST00000567935 TMEM14DPA8MWL7 114 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 E9PLN8 166 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 LANCL1O43813 399 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 WDR1O75083 606 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 IL18BPO95998 194 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 CHRM2P08172 466 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 CD3GP09693 182 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 TRAPPC2P0DI81 140 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 TRAPPC2BP0DI82 140 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 FAUP35544 74 aaKnown RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 KRTAP10-9P60411 292 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 BTG1P62324 171 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 RAB1AP62820 205 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 MALLQ13021 153 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 GPR176Q14439 515 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 OR8B8Q15620 311 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 PLEKHN1Q494U1 663 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 AWAT2Q6E213 333 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 PLXDC2Q6UX71 529 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 Q6ZT83 130 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 IZUMO1Q8IYV9 350 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 CPEB3Q8NE35 698 aaKnown RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 OR52I2Q8NH67 350 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 KCNG3Q8TAE7 436 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 APOBEC3DQ96AK3 386 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 GPR137Q96N19 417 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 NEURL2Q9BR09 285 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 MARVELD1Q9BSK0 173 aa12.67□□□□□ -0.38
COMMD4-221ENST00000567935 ZNF107Q9UII5 783 aaPredicted RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 MRPS28Q9Y2Q9 187 aaKnown RBP12.67□□□□□ -0.38
COMMD4-221ENST00000567935 A0A096LPE4 126 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 hCG_38984A0A1B0GV85 526 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 A0A1W2PPZ6 126 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 ANKRD20A5PA0PJZ0 165 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 MBD3L4A6NDZ8 208 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 MBD3L3A6NE82 208 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 MBD3L5A6NJ08 208 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 H7C417 338 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 SSX4O60224 188 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 RBBP9O75884 186 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 HLA-HP01893 362 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 HNRNPCP07910 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 CD79AP11912 226 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 FAHP16930 419 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 STOMP27105 288 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 PRSS3P35030 304 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 EFNB2P52799 333 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 RAG2P55895 527 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 ACTBP60709 375 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 ACTG1P63261 375 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 QRFPP83859 136 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 HGFACQ04756 655 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 PMPCAQ10713 525 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 SNTB2Q13425 540 aaKnown RBP12.66□□□□□ -0.38
COMMD4-221ENST00000567935 PLA1AQ53H76 456 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 CLVS2Q5SYC1 327 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 AGAP6Q5VW22 663 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 TMEM42Q69YG0 159 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 ANGPTL5Q86XS5 388 aa12.66□□□□□ -0.38
COMMD4-221ENST00000567935 CELF2-AS1Q8N7Q2 184 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms