RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DERL3Q96Q80 235 aa0.44□□□□□ -2.34
CDH1-211ENST00000567320 TBL1XR1Q9BZK7 514 aa0.44□□□□□ -2.34
CDH1-211ENST00000567320 LOXHD1Q8IVV2 1947 aa0.44□□□□□ -2.34
CDH1-211ENST00000567320 MALRD1Q5VYJ5 2156 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 STRCP1A6NGW2 1772 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 A0A0B4J2C4 111 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 NME4O00746 187 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 EIF3HO15372 352 aaKnown RBP eCLIP0.43□□□□□ -2.34
CDH1-211ENST00000567320 CLOCKO15516 846 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 SPAG6O75602 509 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 CTAG2O75638 210 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 CRTAPO75718 401 aaPredicted RBP0.43□□□□□ -2.34
CDH1-211ENST00000567320 HPRT1P00492 218 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 SERPINA3P01011 423 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 TRGV3P03979 118 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 SEC11BP0C7V7 166 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 NCF2P19878 526 aaPredicted RBP0.43□□□□□ -2.34
CDH1-211ENST00000567320 IL3RAP26951 378 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 MYCNOSP40205 109 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 EMP2P54851 167 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 ATP5G2Q06055 141 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 FOXF1Q12946 379 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 SELENBP1Q13228 472 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 TMEM236Q5W0B7 351 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 KDM4DQ6B0I6 523 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 RUFY3Q7L099 469 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 SLC16A14Q7RTX9 510 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 HORMAD1Q86X24 394 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 UBE2J2Q8N2K1 259 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 OR5K2Q8NHB8 316 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 LYPD6BQ8NI32 183 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 ISG20Q96AZ6 181 aaKnown RBP0.43□□□□□ -2.34
CDH1-211ENST00000567320 TRIB3Q96RU7 358 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 ILKAPQ9H0C8 392 aaPredicted RBP0.43□□□□□ -2.34
CDH1-211ENST00000567320 MRM3Q9HC36 420 aaKnown RBP0.43□□□□□ -2.34
CDH1-211ENST00000567320 CR1P17927 2039 aa0.43□□□□□ -2.34
CDH1-211ENST00000567320 PLXNA3P51805 1871 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 A6NDN8 102 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 IGLL5B9A064 214 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 LY6LH3BQJ8 138 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 AP3B1O00203 1094 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 SIRPB1O00241 398 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 FFAR1O14842 300 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 LSM8O95777 96 aaKnown RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 DESP17661 470 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 RAB4AP20338 218 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 PBLDP30039 288 aaPredicted RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 SLC1A2P43004 574 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 MAGEA3P43357 314 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 GBX2P52951 348 aaPredicted RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 LRRC23Q53EV4 343 aaPredicted RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 TRMT10CQ7L0Y3 403 aaKnown RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 COMTD1Q86VU5 262 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 EIF1ADQ8N9N8 165 aaKnown RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 OR10W1Q8NGF6 305 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 OR8K1Q8NGG5 319 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 OR10D4PQ8NGN7 298 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 KCNG3Q8TAE7 436 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 ALS2CR12Q96Q35 445 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 HSPB9Q9BQS6 159 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 EMC6Q9BV81 110 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 FAM206AQ9NX38 181 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 HYPKQ9NX55 129 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 ZNF469Q96JG9 3925 aaPredicted RBP0.42□□□□□ -2.34
CDH1-211ENST00000567320 KANK1Q14678 1352 aa0.42□□□□□ -2.34
CDH1-211ENST00000567320 MROH5Q6ZUA9 1318 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 A0A0G2JMP0 313 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 A0A0X1KG70 313 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 FAM240BA0A1B0GVZ2 78 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 TMEM72A0PK05 275 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 SIGLEC16A6NMB1 481 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 M0R3G1 203 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 SLC16A7O60669 478 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 RAB36O95755 333 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 CXorf1O96002 111 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 GABRG2P18507 467 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 GNRHRP30968 328 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 CFHR2P36980 270 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 TNNT2P45379 298 aaPredicted RBP0.41□□□□□ -2.34
CDH1-211ENST00000567320 TUFMP49411 452 aaKnown RBP0.41□□□□□ -2.34
CDH1-211ENST00000567320 FABP6P51161 128 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 RPL23AP62750 156 aaKnown RBP0.41□□□□□ -2.34
CDH1-211ENST00000567320 PPP1R7Q15435 360 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 TCF23Q7RTU1 214 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 ITPRIPQ8IWB1 547 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 OR4A4PQ8NGN8 299 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 RSPH1Q8WYR4 309 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 TBC1D31Q96DN5 1066 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 CENPKQ9BS16 269 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 SFXN3Q9BWM7 321 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 KIR3DX1Q9H7L2 352 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 ACP6Q9NPH0 428 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 ZNF443Q9Y2A4 671 aaPredicted RBP0.41□□□□□ -2.34
CDH1-211ENST00000567320 SLC17A4Q9Y2C5 497 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 COL6A6A6NMZ7 2263 aa0.41□□□□□ -2.34
CDH1-211ENST00000567320 ZNF729A6NN14 1252 aaPredicted RBP0.4□□□□□ -2.35
CDH1-211ENST00000567320 HBE1P02100 147 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 CGB7P0DN87 165 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 RRM2P31350 389 aa0.4□□□□□ -2.35
CDH1-211ENST00000567320 PRSS3P35030 304 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms