RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 PROK1P58294 105 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 CSNK2BP67870 215 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 STUMQ69YW2 141 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 KRT74Q7RTS7 529 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 OR10G2Q8NGC3 310 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 GIPC3Q8TF64 312 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 NSL1Q96IY1 281 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 C16orf95Q9H693 158 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 NIPAL2Q9H841 368 aa12.33□□□□□ -0.44
RNF40-209ENST00000566703 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 FAM183AA6NL82 134 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 KRTAP10-3P60369 221 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 GNGT1P63211 74 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 TAF9Q16594 264 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 MIDNQ504T8 468 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 ASPHD2Q6ICH7 369 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 ZNF788Q6ZQV5 615 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 FAM216BQ8N7L0 139 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 OTOSQ8NHW6 89 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 OR5P3Q8WZ94 311 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 RAB3IPQ96QF0 476 aaPredicted RBP12.32□□□□□ -0.44
RNF40-209ENST00000566703 FEVQ99581 238 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 NIPSNAP1Q9BPW8 284 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 PPP1R3EQ9H7J1 279 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 MED20Q9H944 212 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 DNAJC27Q9NZQ0 273 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 ONECUT1Q9UBC0 465 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 DNAJB11Q9UBS4 358 aa12.32□□□□□ -0.44
RNF40-209ENST00000566703 A0A1B0GW55 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 ACOD1A6NK06 481 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 PRR23D1E9PI22 279 aaPredicted RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 H3BN98 237 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 TSPAN9O75954 239 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 HMGN1P05114 100 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 LYNP07948 512 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L2P0CJ85 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 PRR23D2P0DMB1 279 aaPredicted RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 RAP2AP10114 183 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 HOXB6P17509 224 aaKnown RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 TGFBR2P37173 567 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 CAV3P56539 151 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 ELF3P78545 371 aaPredicted RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 MS4A2Q01362 244 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 PRDX4Q13162 271 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 Q6ZSV7 163 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 PDZD9Q8IXQ8 264 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 Q8N7P7 452 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 PAPD5Q8NDF8 572 aaKnown RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 OR5T2Q8NGG2 359 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 THEM6Q8WUY1 208 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 TNFRSF14Q92956 283 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 OTULINQ96BN8 352 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 SEH1LQ96EE3 360 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 RNF170Q96K19 258 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 HIST1H2AAQ96QV6 131 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 AMELYQ99218 206 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 RBM4BQ9BQ04 359 aaKnown RBP12.31□□□□□ -0.44
RNF40-209ENST00000566703 OR51V1Q9H2C8 321 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 BRD7Q9NPI1 651 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 ZNRD1Q9P1U0 126 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
RNF40-209ENST00000566703 NKX6-3A6NJ46 265 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 ZNF850A8MQ14 1090 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 RNASEK-C17orf49H0YIS7 233 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 M0R1W7 72 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 NPFFO15130 113 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 PRODHO43272 600 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 ACKR3P25106 362 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 DCTDP32321 178 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 UBE2E1P51965 193 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 ACSM1Q08AH1 577 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 IKZF1Q13422 519 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 SLC35D3Q5M8T2 416 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 NCR3LG1Q68D85 454 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 OR5R1Q8NH85 324 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 ANGPTL6Q8NI99 470 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 PIGCQ92535 297 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 RPL3LQ92901 407 aaKnown RBP12.3□□□□□ -0.44
RNF40-209ENST00000566703 PKP2Q99959 881 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 CHID1Q9BWS9 393 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 METTL8Q9H825 291 aaKnown RBP12.3□□□□□ -0.44
RNF40-209ENST00000566703 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 VPREB3Q9UKI3 123 aa12.3□□□□□ -0.44
RNF40-209ENST00000566703 SIGLEC5O15389 551 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 CST1P01037 141 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 ACAA1P09110 424 aaPredicted RBP12.29□□□□□ -0.44
RNF40-209ENST00000566703 ATP6V1B1P15313 513 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 ALOX5APP20292 161 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 MAP2K3P46734 347 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 CDK5Q00535 292 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 BLMHQ13867 455 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 DGUOKQ16854 277 aa12.29□□□□□ -0.44
RNF40-209ENST00000566703 GFOD2Q3B7J2 385 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms