RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 CPNE2Q96FN4 548 aaPredicted RBP16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 SPOCK3Q9BQ16 436 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 WDR12Q9GZL7 423 aaKnown RBP16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 AKIP1Q9NQ31 210 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 COMMD3Q9UBI1 195 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 KCNN3Q9UGI6 736 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 STEAP1Q9UHE8 339 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 SPATA2Q9UM82 520 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 SPEF1Q9Y4P9 236 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 ADGRG4Q8IZF6 3080 aa16.42■□□□□ 0.22
CSPG4P13-201ENST00000565545 SETD2Q9BYW2 2564 aaPredicted RBP16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 M0R1B8 84 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 CST4P01036 141 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 CRYAAP02489 173 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 OCMP0CE72 109 aaPredicted RBP16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 RAC2P15153 192 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 PRKACBP22694 351 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 ZNF45Q02386 682 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 ZNF846Q147U1 533 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 RAB11BQ15907 218 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 HES5Q5TA89 166 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 FAM166AQ6J272 317 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 LYPD6Q86Y78 171 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 OR5AS1Q8N127 324 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 DNAAF1Q8NEP3 725 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 CA5BP1Q8WTZ4 195 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 SPSB1Q96BD6 273 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 SORCS2Q96PQ0 1159 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 METTL17Q9H7H0 456 aaPredicted RBP16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 ABCB9Q9NP78 766 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 NGBQ9NPG2 151 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 KCNJ16Q9NPI9 418 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 ETV7Q9Y603 341 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 HIVEP1P15822 2718 aa16.41■□□□□ 0.22
CSPG4P13-201ENST00000565545 CD300LBA8K4G0 201 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 GMDSO60547 372 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 NRASP01111 189 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 FAM157BP0CG42 384 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 HTR2CP28335 458 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 TNFSF8P32971 234 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 RIN1Q13671 783 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 HLXQ14774 488 aaPredicted RBP16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 SPANXN2Q5MJ10 180 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 SEZ6L2Q6UXD5 910 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 MEX3BQ6ZN04 569 aaKnown RBP16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 CCDC190Q86UF4 302 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 JAGN1Q8N5M9 183 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 OR56B2PQ8NGI1 322 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 OR52N4Q8NGI2 321 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 OR1J1Q8NGS3 322 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 TRMT10AQ8TBZ6 339 aaKnown RBP16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 MIXL1Q9H2W2 232 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 POFUT1Q9H488 388 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 NPAP1Q9NZP6 1156 aa16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 HEATR1Q9H583 2144 aaKnown RBP16.4■□□□□ 0.22
CSPG4P13-201ENST00000565545 IGKV1-9A0A0C4DH69 117 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 FAM90A27PA6NNH2 459 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 HCKP08631 526 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 BMP4P12644 408 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 PTAFRP25105 342 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 AZGP1P25311 298 aaKnown RBP16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 ZNF93P35789 620 aaPredicted RBP16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 SORDQ00796 357 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 TESK1Q15569 626 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 UBE2V2Q15819 145 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 METAP1DQ6UB28 335 aaPredicted RBP16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 TMEM108Q6UXF1 575 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 SPNS3Q6ZMD2 512 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 LRRC28Q86X40 367 aaPredicted RBP16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 LAX1Q8IWV1 398 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 SLC25A40Q8TBP6 338 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 UBASH3BQ8TF42 649 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 ZFAND2BQ8WV99 257 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 OR51B6Q9H340 312 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 LIN7BQ9HAP6 207 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 SLC7A11Q9UPY5 501 aa16.39■□□□□ 0.21
CSPG4P13-201ENST00000565545 HPGDSO60760 199 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 APOA1P02647 267 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 SNRPBP14678 240 aaKnown RBP16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 CALCRP30988 508 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 ZNF718Q3SXZ3 478 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 MFSD4AQ8N468 514 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 SAMD12Q8N8I0 201 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 PIGCQ92535 297 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 SLC25A28Q96A46 364 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 HAVCR1Q96D42 359 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 CMBLQ96DG6 245 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 MARS2Q96GW9 593 aaKnown RBP16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 DIRAS2Q96HU8 199 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 OR2J1Q9GZK6 312 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 GPR173Q9NS66 373 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 CGGBP1Q9UFW8 167 aaPredicted RBP16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 NDRG3Q9UGV2 375 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 MPC1Q9Y5U8 109 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 CSMD2Q7Z408 3487 aa16.38■□□□□ 0.21
CSPG4P13-201ENST00000565545 ANKRD30BLA7E2S9 258 aa16.37■□□□□ 0.21
CSPG4P13-201ENST00000565545 PAHP00439 452 aa16.37■□□□□ 0.21
CSPG4P13-201ENST00000565545 THBDP07204 575 aa16.37■□□□□ 0.21
CSPG4P13-201ENST00000565545 CD40P25942 277 aa16.37■□□□□ 0.21
CSPG4P13-201ENST00000565545 PTBP1P26599 531 aaKnown RBP eCLIP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms