RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ERLIN1O75477 346 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 WBP4O75554 376 aaKnown RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 KLHL2O95198 593 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 LSM8O95777 96 aaKnown RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 FTH1P02794 183 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 MT-ND4P03905 459 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 MYL2P10916 166 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 EIF2S2P20042 333 aaKnown RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 BCKDHBP21953 392 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 MPV17P39210 176 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 ZNF121P58317 390 aaPredicted RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 RCN1Q15293 331 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 LUZP6Q538Z0 58 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 GCSAMLQ5JQS6 135 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 TTC23LQ6PF05 361 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 TBPL2Q6SJ96 375 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 ZYG11AQ6WRX3 759 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 RTL4Q6ZR62 310 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 ERO1BQ86YB8 467 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 HGDQ93099 445 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 RASD2Q96D21 266 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 PLIN2Q99541 437 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 C20orf24Q9BUV8 137 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 TMEM165Q9HC07 324 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 NEK6Q9HC98 313 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 RRAGDQ9NQL2 400 aaPredicted RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 TECPR2O15040 1411 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 NKTRP30414 1462 aaKnown RBP1.79□□□□□ -2.12
PALB2-203ENST00000565038 TRPM2O94759 1503 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 UNC13BO14795 1591 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 CLTCL1P53675 1640 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 MYO5BQ9ULV0 1848 aa1.79□□□□□ -2.12
PALB2-203ENST00000565038 SCN4AP35499 1836 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 EIF2AK4Q9P2K8 1649 aaKnown RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 GLI3P10071 1580 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 NWD1Q149M9 1564 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 PIK3C2GO75747 1445 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 BLMP54132 1417 aaPredicted RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 TNS3Q68CZ2 1445 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 SSH2Q76I76 1423 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 MAP3K19Q56UN5 1328 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 TRBV11-1A0A0K0K1C0 115 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 OR6C70A6NIJ9 312 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 PRAMEF26H0Y7S4 382 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 TAAR5O14804 337 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 GATBO75879 557 aaKnown RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 ASGR1P07306 291 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 PFN1P07737 140 aaKnown RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 PGA5P0DJD9 388 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 USF1P22415 310 aaPredicted RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 LIPEQ05469 1076 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 ALKBH6Q3KRA9 238 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 OR2Z1Q8NG97 314 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 OR9G4Q8NGQ1 327 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 RXFP4Q8TDU9 374 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 DYNLL2Q96FJ2 89 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 KCNS1Q96KK3 526 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 BTN2A3PQ96KV6 586 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 CCDC77Q9BR77 488 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 TM2D3Q9BRN9 247 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 C1orf50Q9BV19 199 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 ACTR3CQ9C0K3 210 aaPredicted RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 ZNF442Q9H7R0 627 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 MRM3Q9HC36 420 aaKnown RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 ACP6Q9NPH0 428 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 RGS18Q9NS28 235 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 DCAF16Q9NXF7 216 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 PTTG3PQ9NZH4 202 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 MMACHCQ9Y4U1 282 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 LRRC42Q9Y546 428 aa1.78□□□□□ -2.12
PALB2-203ENST00000565038 GOLGB1Q14789 3259 aaKnown RBP1.78□□□□□ -2.12
PALB2-203ENST00000565038 POLR1AO95602 1720 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 KDM5AP29375 1690 aaKnown RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 GCC2Q8IWJ2 1684 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 CDK12Q9NYV4 1490 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 NRXN1Q9ULB1 1477 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 DCCP43146 1447 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 PPIP5K1Q6PFW1 1433 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 POLR3AO14802 1390 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 ARHGEF10O15013 1369 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 KTN1Q86UP2 1357 aaKnown RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 EVC2Q86UK5 1308 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 IGHV3OR16-9A0A0B4J2B5 98 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 A6NDN8 102 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 NME4O00746 187 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 HUS1O60921 280 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 TGM6O95932 706 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 HPRT1P00492 218 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 PGA4P0DJD7 388 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 PGA3P0DJD8 388 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 HSPD1P10809 573 aaKnown RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 PRKACBP22694 351 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 GTF2E2P29084 291 aaKnown RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 GALR1P47211 349 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 RAB9AP51151 201 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 ELF3P78545 371 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 BEX3Q00994 111 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 CUL2Q13617 745 aa1.77□□□□□ -2.13
PALB2-203ENST00000565038 ZNF829Q3KNS6 432 aaPredicted RBP1.77□□□□□ -2.13
PALB2-203ENST00000565038 OPN5Q6U736 354 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms