RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 DEFB121Q5J5C9 76 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 DHRS7BQ6IAN0 325 aaPredicted RBP13.18□□□□□ -0.3
RNF40-205ENST00000563909 CFAP77Q6ZQR2 320 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 DPY19L4Q7Z388 723 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 DCXRQ7Z4W1 244 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 KLBQ86Z14 1044 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 TFAP2CQ92754 450 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 ITPKCQ96DU7 683 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 SIGLEC11Q96RL6 698 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 CNN2Q99439 309 aaKnown RBP13.18□□□□□ -0.3
RNF40-205ENST00000563909 COQ7Q99807 217 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 ACOXLQ9NUZ1 547 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 TENM2Q9NT68 2774 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 OR6C6A6NF89 314 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 TSPAN9O75954 239 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 CLIC3O95833 236 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 ATP6V1E1P36543 226 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 NAA10P41227 235 aaPredicted RBP13.17□□□□□ -0.3
RNF40-205ENST00000563909 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 FOXB2Q5VYV0 432 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 ARL9Q6T311 187 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 C8orf59Q8N0T1 100 aaPredicted RBP13.17□□□□□ -0.3
RNF40-205ENST00000563909 OTOSQ8NHW6 89 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 ABHD4Q8TB40 342 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 GATAD2BQ8WXI9 593 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 SLAMF6Q96DU3 332 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 MAP6Q96JE9 813 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 MNTQ99583 582 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 ATF6BQ99941 703 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 PPP1R3CQ9UQK1 317 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 TMEM14AQ9Y6G1 99 aa13.17□□□□□ -0.3
RNF40-205ENST00000563909 CENPVL3A0A0U1RRI6 287 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 K7EIL1 84 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 ZNF205O95201 554 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 LYNP07948 512 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 SFTPBP07988 381 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
RNF40-205ENST00000563909 PSKH1P11801 424 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 TNFRSF1AP19438 455 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 CPT2P23786 658 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 PPP1CBP62140 327 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 CDK5R2Q13319 367 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 TAF13Q15543 124 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 IZUMO2Q6UXV1 221 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 RFPL4BQ6ZWI9 263 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 OR51G2Q8NGK0 314 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 THEM6Q8WUY1 208 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 ABHD6Q9BV23 337 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 ELOVL3Q9HB03 270 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 ADGRL4Q9HBW9 690 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 TMEM165Q9HC07 324 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 PNRC2Q9NPJ4 139 aaKnown RBP13.16□□□□□ -0.3
RNF40-205ENST00000563909 CENPMQ9NSP4 180 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 AASSQ9UDR5 926 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 MIOXQ9UGB7 285 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 LAMP5Q9UJQ1 280 aa13.16□□□□□ -0.3
RNF40-205ENST00000563909 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
RNF40-205ENST00000563909 ZNF878C9JN71 531 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 TMEM178BH3BS89 294 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 H3BSA7 217 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 PHYHO14832 338 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 TNFSF4P23510 183 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 SLC15A1P46059 708 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 ISL1P61371 349 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 SNCBQ16143 134 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 SLC35F2Q8IXU6 374 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 APH1BQ8WW43 257 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 ASB17Q8WXJ9 295 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 SPTSSAQ969W0 71 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 NEIL1Q96FI4 390 aaPredicted RBP13.15□□□□□ -0.3
RNF40-205ENST00000563909 C4orf45Q96LM5 186 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 DPAGT1Q9H3H5 408 aa13.15□□□□□ -0.3
RNF40-205ENST00000563909 RPL36Q9Y3U8 105 aaKnown RBP13.15□□□□□ -0.3
RNF40-205ENST00000563909 A0A0U1RQK1 487 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 ZNF670-ZNF695F2Z2N8 137 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 P2RY10O00398 339 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 TIMM8AO60220 97 aaPredicted RBP13.14□□□□□ -0.31
RNF40-205ENST00000563909 ICMTO60725 284 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 ABHD16AO95870 558 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 OR2T7P0C7T2 308 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 ALOX5APP20292 161 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 PITPNBP48739 271 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 RGS6P49758 472 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 TPTEP56180 551 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 GRB2P62993 217 aaKnown RBP13.14□□□□□ -0.31
RNF40-205ENST00000563909 CD69Q07108 199 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 KRTAP27-1Q3LI81 207 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 SLC35E4Q6ICL7 350 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 KCTD18Q6PI47 426 aaPredicted RBP13.14□□□□□ -0.31
RNF40-205ENST00000563909 THAP5Q7Z6K1 395 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 LDLRAD3Q86YD5 345 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 OR2Z1Q8NG97 314 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 OR2T27Q8NH04 317 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 RNF133Q8WVZ7 376 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 RNFT2Q96EX2 444 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 KCNJ15Q99712 375 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 COPS4Q9BT78 406 aa13.14□□□□□ -0.31
RNF40-205ENST00000563909 TBCCD1Q9NVR7 557 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms