RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 MRPL21Q7Z2W9 205 aaKnown RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 LHFPL4Q7Z7J7 247 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ADCK1Q86TW2 530 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SPERTQ8NA61 448 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 OR1M1Q8NGA1 313 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 OR4F17Q8NGA8 305 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ANGPTL6Q8NI99 470 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SPRYD4Q8WW59 207 aaPredicted RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SPSB4Q96A44 273 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 MCUR1Q96AQ8 359 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ZNF799Q96GE5 643 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 FAM46AQ96IP4 442 aaKnown RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 OR4F4Q96R69 305 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 DDOQ99489 341 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 FUZQ9BT04 418 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 GORASP2Q9H8Y8 452 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 RNPEPL1Q9HAU8 725 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 INPP5EQ9NRR6 644 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ZNF222Q9UK12 451 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 SAMD4AQ9UPU9 718 aaKnown RBP8.35□□□□□ -1.07
SF3B3-204ENST00000563739 POLR1DQ9Y2S0 133 aa8.35□□□□□ -1.07
SF3B3-204ENST00000563739 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 hCG_1807616A0A1W2PRN6 198 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 FAM90A8PA6NJQ4 464 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 NDUFB2O95178 105 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 PAHP00439 452 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 IFNW1P05000 195 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 SLC2A1P11166 492 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 ATP6V1B2P21281 511 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 EEF1B2P24534 225 aaKnown RBP8.34□□□□□ -1.07
SF3B3-204ENST00000563739 SEC23BQ15437 767 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 GPR139Q6DWJ6 353 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 C10orf99Q6UWK7 81 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 ZBTB46Q86UZ6 589 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 TMEM219Q86XT9 240 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 MKXQ8IYA7 352 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 FAM86B1Q8N7N1 296 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 OR51G2Q8NGK0 314 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 CCDC124Q96CT7 223 aaKnown RBP8.34□□□□□ -1.07
SF3B3-204ENST00000563739 RSRC1Q96IZ7 334 aaKnown RBP8.34□□□□□ -1.07
SF3B3-204ENST00000563739 CLPTM1LQ96KA5 538 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 NSMCE2Q96MF7 247 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 OCSTAMPQ9BR26 566 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 SLC22A4Q9H015 551 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 MUC13Q9H3R2 512 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 METTL8Q9H825 291 aaKnown RBP8.34□□□□□ -1.07
SF3B3-204ENST00000563739 SNTG1Q9NSN8 517 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 DCAF13Q9NV06 445 aaKnown RBP8.34□□□□□ -1.07
SF3B3-204ENST00000563739 TCF19Q9Y242 345 aa8.34□□□□□ -1.07
SF3B3-204ENST00000563739 IGKV1D-17A0A075B6S4 117 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 hCG_38984A0A1B0GV85 526 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 A0A1W2PRX2 142 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 OR6C68A6NDL8 312 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 VGLL3A8MV65 326 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 SIGLEC5O15389 551 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 CD33P20138 364 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 DCTDP32321 178 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 RAB13P51153 203 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 EMX1Q04741 257 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 MICBQ29980 383 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 NCR3LG1Q68D85 454 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 LCN8Q6JVE9 175 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 PGM2L1Q6PCE3 622 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 FKBP9P1Q75LS8 142 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 PRSS45Q7RTY3 260 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 RNF113BQ8IZP6 322 aaKnown RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 CMTM4Q8IZR5 234 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 H1FXQ92522 213 aaKnown RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 C12orf43Q96C57 262 aaKnown RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 DUS3LQ96G46 650 aaKnown RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 NMNAT3Q96T66 252 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 PITX2Q99697 317 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 NKX3-1Q99801 234 aaPredicted RBP8.33□□□□□ -1.08
SF3B3-204ENST00000563739 THTPAQ9BU02 230 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 C19orf12Q9NSK7 152 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 ACTR3BQ9P1U1 418 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 ZNF319Q9P2F9 582 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 V9GYQ6 96 aa8.33□□□□□ -1.08
SF3B3-204ENST00000563739 BHLHE40O14503 412 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 CDIPTO14735 213 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 NDUFB3O43676 98 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ANGPTL7O43827 346 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 SEMG1P04279 462 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 HIST1H1CP16403 213 aaKnown RBP8.32□□□□□ -1.08
SF3B3-204ENST00000563739 CAV3P56539 151 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 BLCAPP62952 87 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 FAM3AP98173 230 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 CD69Q07108 199 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ECH1Q13011 328 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 MALLQ13021 153 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 TRIM25Q14258 630 aaKnown RBP8.32□□□□□ -1.08
SF3B3-204ENST00000563739 CYP2R1Q6VVX0 501 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ZNF730Q6ZMV8 503 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 SLC36A1Q7Z2H8 476 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 LNX2Q8N448 690 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 LINC00482Q8N8I6 264 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 HPSE2Q8WWQ2 592 aa8.32□□□□□ -1.08
SF3B3-204ENST00000563739 ASB9Q96DX5 294 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms