RNA–Protein interactions for RNA: ENST00000562638.5

TCF4-215, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 401 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-215ENST00000562638 DOK4Q8TEW6 326 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 C15orf40Q8WUR7 153 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 TMEM170AQ8WVE7 144 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 TMED6Q8WW62 240 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 CFHR4Q92496 578 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 FAM3CQ92520 227 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 NRGNQ92686 78 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 FGF11Q92914 225 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 APH1AQ96BI3 265 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 MOAP1Q96BY2 351 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 TSPAN32Q96QS1 320 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 GABRG3Q99928 467 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 SLC25A21Q9BQT8 299 aaPredicted RBP4.38□□□□□ -1.71
TCF4-215ENST00000562638 QTRT1Q9BXR0 403 aaKnown RBP4.38□□□□□ -1.71
TCF4-215ENST00000562638 COL25A1Q9BXS0 654 aaPredicted RBP4.38□□□□□ -1.71
TCF4-215ENST00000562638 SLC25A51Q9H1U9 297 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 TUBB1Q9H4B7 451 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 RHOJQ9H4E5 214 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 REEP1Q9H902 201 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 LYRM4Q9HD34 91 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 SPANXA1Q9NS26 97 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 HCFC1R1Q9NWW0 138 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 GALPQ9UBC7 116 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 IL36AQ9UHA7 158 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 FBXW11Q9UKB1 542 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 UFC1Q9Y3C8 167 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 CSDC2Q9Y534 153 aaKnown RBP4.38□□□□□ -1.71
TCF4-215ENST00000562638 DNAJC15Q9Y5T4 150 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 SNX11Q9Y5W9 270 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 TNRC6CQ9HCJ0 1690 aaKnown RBP4.38□□□□□ -1.71
TCF4-215ENST00000562638 KAT6AQ92794 2004 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 NRXN2Q9P2S2 1712 aa4.38□□□□□ -1.71
TCF4-215ENST00000562638 PARP14Q460N5 1801 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PATJQ8NI35 1801 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 TRPM7Q96QT4 1865 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ALPK3Q96L96 1907 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 LOC100509620A0A075B734 347 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ARL5CA6NH57 179 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ZNF860A6NHJ4 632 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 C15orf65H3BRN8 121 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PYCARD-AS1I3L0S3 204 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SLC17A3O00476 420 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 MPPED1O15442 326 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 LATO43561 262 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PSMD10O75832 226 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 WISP3O95389 354 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 CDS2O95674 445 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SEMA4FO95754 770 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 HBZP02008 142 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 C4BPAP04003 597 aaKnown RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 MAS1P04201 325 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ITGB2P05107 769 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 DBHP09172 617 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 OR12D1P0DN82 309 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 UROSP10746 265 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PSG2P11465 335 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 CTSEP14091 401 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 EPORP19235 508 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 GATA3P23771 443 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 NMBRP28336 390 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 KDELR2P33947 212 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 CHI3L1P36222 383 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 PTH2RP49190 550 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 DUSP3P51452 185 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 LBX1P52954 281 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SLC25A1P53007 311 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PLP1P60201 277 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ERVK11-1P61568 191 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 CDK3Q00526 305 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 COL10A1Q03692 680 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 TLE3Q04726 772 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ENDOGQ14249 297 aaKnown RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 GNMTQ14749 295 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ANKRD55Q3KP44 614 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SLC25A52Q3SY17 297 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 CD300EQ496F6 205 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 ACSM3Q53FZ2 586 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SLC25A53Q5H9E4 307 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 RAB41Q5JT25 222 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 LYPLAL1Q5VWZ2 237 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ZNF343Q6P1L6 599 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 GGT6Q6P531 493 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 TPRG1Q6ZUI0 275 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 CBLL1Q75N03 491 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 OLIG3Q7RTU3 272 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 MARCH9Q86YJ5 346 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 LGI4Q8N135 537 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ARHGEF39Q8N4T4 335 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 SMIM20Q8N5G0 67 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 C1orf162Q8NEQ5 155 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 OR52E5Q8NH55 327 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ABHD4Q8TB40 342 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 PROKR1Q8TCW9 393 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 VN1R17PQ8TDU5 208 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 ZNF418Q8TF45 676 aaPredicted RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 TWIST2Q8WVJ9 160 aa4.37□□□□□ -1.71
TCF4-215ENST00000562638 DAZLQ92904 295 aaKnown RBP4.37□□□□□ -1.71
TCF4-215ENST00000562638 ZNF681Q96N22 645 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms