RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 SFXN2Q96NB2 322 aa10.19□□□□□ -0.78
PCAT1-202ENST00000561978 UCN2Q96RP3 112 aa10.19□□□□□ -0.78
PCAT1-202ENST00000561978 SLC25A21Q9BQT8 299 aaPredicted RBP10.19□□□□□ -0.78
PCAT1-202ENST00000561978 ALX4Q9H161 411 aaPredicted RBP10.19□□□□□ -0.78
PCAT1-202ENST00000561978 ZFP64Q9NPA5 681 aa10.19□□□□□ -0.78
PCAT1-202ENST00000561978 DLL4Q9NR61 685 aa10.19□□□□□ -0.78
PCAT1-202ENST00000561978 ABI3Q9P2A4 366 aa10.19□□□□□ -0.78
PCAT1-202ENST00000561978 BOKQ9UMX3 212 aaPredicted RBP10.19□□□□□ -0.78
PCAT1-202ENST00000561978 A0A0U1RQV5 110 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 RAB3DO95716 219 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 CD3DP04234 171 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 UBBP0CG47 229 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 DNASE1P24855 282 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 CASRP41180 1078 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 MRPS34P82930 218 aaKnown RBP10.18□□□□□ -0.78
PCAT1-202ENST00000561978 MEF2DQ14814 521 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 FAM27BQ5VT28 67 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 LAMTOR1Q6IAA8 161 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 FAM57BQ71RH2 274 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 ANGPTL5Q86XS5 388 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 FAM109AQ8N4B1 249 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 C9orf62Q8N4C0 152 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 OR13C9Q8NGT0 318 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 CCDC107Q8WV48 283 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 SPTSSAQ969W0 71 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 C10orf35Q96D05 121 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 SIGLEC12Q96PQ1 595 aa10.18□□□□□ -0.78
PCAT1-202ENST00000561978 CHTOPQ9Y3Y2 248 aaKnown RBP10.18□□□□□ -0.78
PCAT1-202ENST00000561978 OR5H15A6NDH6 313 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 PYCARD-AS1I3L0S3 204 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SMAD9O15198 467 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 TRAPPC6AO75865 159 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ANXA7P20073 488 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 CD96P40200 585 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SELENOPP49908 381 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 QRFPP83859 136 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SCRN3Q0VDG4 424 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ECH1Q13011 328 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ENDOGQ14249 297 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 PHYHD1Q5SRE7 291 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 AWAT2Q6E213 333 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SEZ6L2Q6UXD5 910 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 Q6ZTK2 550 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ZNF584Q8IVC4 421 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ZNF680Q8NEM1 530 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 OR51S1Q8NGJ8 323 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 OR8S1Q8NH09 359 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 OR2V1Q8NHB1 315 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 AQP3Q92482 292 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 HAS2Q92819 552 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 NABP1Q96AH0 204 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 HES7Q9BYE0 225 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SRXN1Q9BYN0 137 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 GHRLQ9UBU3 117 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 PHF3Q92576 2039 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 HELZ2Q9BYK8 2649 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ZNF736B4DX44 427 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 RAB27BO00194 218 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 C1QL1O75973 258 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ALX3O95076 343 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 CD74P04233 296 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 RLN1P04808 185 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 GIPP09681 153 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 VSIG8P0DPA2 414 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SLC2A1P11166 492 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 C4BPBP20851 252 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 TNFSF10P50591 281 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 KLRB1Q12918 225 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ZNF260Q3ZCT1 412 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 PLEKHN1Q494U1 663 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 FAM209BQ5JX69 171 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 OR10K2Q6IF99 312 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 LIN54Q6MZP7 749 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SLC36A1Q7Z2H8 476 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 ZNF101Q8IZC7 436 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 PAQR4Q8N4S7 273 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 OR14K1Q8NGZ2 314 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 CPT1CQ8TCG5 803 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 CPNE4Q96A23 557 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 FAM71F1Q96KD3 344 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 NKX3-1Q99801 234 aaPredicted RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 SEC22CQ9BRL7 303 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 LRFN1Q9P244 771 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 MYEF2Q9P2K5 600 aaKnown RBP10.17□□□□□ -0.78
PCAT1-202ENST00000561978 MGAT4CQ9UBM8 478 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 FLVCR1Q9Y5Y0 555 aa10.17□□□□□ -0.78
PCAT1-202ENST00000561978 MEIS3P1A6NDR6 274 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 LRRC3CA6NJW4 275 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 TMEM14DPA8MWL7 114 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 DISC1C4P0D8 188 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 F5H5K5 113 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 AKR7A2O43488 359 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 NEURL1O76050 574 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 IGLV3-1P01715 115 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 HCKP08631 526 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 CST2P09228 141 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 ABOP16442 354 aa10.16□□□□□ -0.78
PCAT1-202ENST00000561978 POU3F2P20265 443 aaPredicted RBP10.16□□□□□ -0.78
PCAT1-202ENST00000561978 GDF1P27539 372 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms