RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TMCO1Q9UM00 188 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 MOKQ9UQ07 419 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 C15orf41Q9Y2V0 281 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 FLNCQ14315 2725 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 MYH11P35749 1972 aa2.72□□□□□ -1.97
HERC1-215ENST00000561436 TRPM6Q9BX84 2022 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 NF1P21359 2839 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZFC3H1O60293 1989 aaKnown RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 SCN8AQ9UQD0 1980 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 IGHV1OR15-1A0A075B7D0 117 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 LRP5LA4QPB2 252 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 TRDCB7Z8K6 153 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 KIF2AO00139 706 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 CDC7O00311 574 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CXCL13O43927 109 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 NIPSNAP2O75323 286 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 TNFSF13O75888 250 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 IGHV3-23P01764 117 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SLC35E2BP0CK96 405 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CCL3P10147 92 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 POU2F1P14859 743 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SLC25A16P16260 332 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZNF708P17019 499 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 PCMT1P22061 227 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZBTB25P24278 435 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 RPL22P35268 128 aaKnown RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 COILP38432 576 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 DNASE1L1P49184 302 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 EFNB2P52799 333 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ATP5J2P56134 94 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZNF45Q02386 682 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CAPRIN1Q14444 709 aaKnown RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 TP53I3Q53FA7 332 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SAMD4BQ5PRF9 694 aaKnown RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CYB5R2Q6BCY4 276 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 PEX26Q7Z412 305 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 THOC6Q86W42 341 aaKnown RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 VSTM4Q8IW00 320 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 TMEM123Q8N131 208 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SVOPLQ8N434 492 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 OTUD6BQ8N6M0 293 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 BBOF1Q8ND07 529 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 OR10H4Q8NGA5 316 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 OR1J4Q8NGS1 313 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 DNAJA4Q8WW22 397 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 HAVCR1Q96D42 359 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 STARD4Q96DR4 205 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 NOL4LQ96MY1 436 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 WFIKKN1Q96NZ8 548 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SERPINB12Q96P63 405 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 OR4K3Q96R72 315 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZBTB18Q99592 522 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CHP1Q99653 195 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZNF184Q99676 751 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 BEX2Q9BXY8 128 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 UGT2B28Q9BY64 529 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 SRXN1Q9BYN0 137 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CHIAQ9BZP6 476 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 OR8D2Q9GZM6 311 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 GLIPR2Q9H4G4 154 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ZNF702PQ9H963 129 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 PLGRKTQ9HBL7 147 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 POPDC3Q9HBV1 291 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 PROK2Q9HC23 129 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 MYOZ1Q9NP98 299 aaPredicted RBP2.71□□□□□ -1.98
HERC1-215ENST00000561436 SDHAF3Q9NRP4 125 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 B3GNT2Q9NY97 397 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CD274Q9NZQ7 290 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 ONECUT1Q9UBC0 465 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CLCF1Q9UBD9 225 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 BTNL2Q9UIR0 455 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 FBXO5Q9UKT4 447 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 PDZD2O15018 2839 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 CSMD2Q7Z408 3487 aa2.71□□□□□ -1.98
HERC1-215ENST00000561436 NBEAL1Q6ZS30 2694 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ICE1Q9Y2F5 2266 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 F8P00451 2351 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 TRAV26-1A0A087WT03 109 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 A0A0G2JMM0 328 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA8QA0A0J9YX86 632 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 A0A1W2PPB8 328 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 A0A1W2PRS3 328 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA8OA6NCC3 632 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ZNF860A6NHJ4 632 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 A8MUA0 341 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ZNF705EA8MWA4 302 aaPredicted RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 KIR3DP1A8MWS1 328 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA8NF8WBI6 632 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GOLGA8RI6L899 631 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 NDUFS8O00217 210 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 HDAC3O15379 428 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 RIPK2O43353 540 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ERI3O43414 337 aaKnown RBP2.7□□□□□ -1.98
HERC1-215ENST00000561436 TRAPPC6AO75865 159 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 LYPD3O95274 346 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 ETHE1O95571 254 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 GPR75O95800 540 aa2.7□□□□□ -1.98
HERC1-215ENST00000561436 HSPB1P04792 205 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms