RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 BPIFA2Q96DR5 249 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SMIM19Q96E16 107 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SGTBQ96EQ0 304 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 PGLYRP3Q96LB9 341 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 TEAD3Q99594 435 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 THAP7Q9BT49 309 aaPredicted RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 SOX7Q9BT81 388 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 WACQ9BTA9 647 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ALG12Q9BV10 488 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 KRTAP4-8Q9BYQ9 185 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 RAB1BQ9H0U4 201 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 DPAGT1Q9H3H5 408 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 GHITMQ9H3K2 345 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 TXNIPQ9H3M7 391 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 EGLN3Q9H6Z9 239 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 HINT3Q9NQE9 182 aaKnown RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 MYEF2Q9P2K5 600 aaKnown RBP5.89□□□□□ -1.47
SPG11-224ENST00000561268 COMMD3Q9UBI1 195 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 EXTL2Q9UBQ6 330 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 LPAR3Q9UBY5 353 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SPATA2Q9UM82 520 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ETV7Q9Y603 341 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 ALG5Q9Y673 324 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 CACNG2Q9Y698 323 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 STAB1Q9NY15 2570 aa5.89□□□□□ -1.47
SPG11-224ENST00000561268 SVEP1Q4LDE5 3571 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 A0A0G2JK05 382 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 A0A1W2PRG6 482 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 LINC00862A6NCI5 91 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 SHOXO15266 292 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 HPGDSO60760 199 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 SERPINI2O75830 405 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 LALBAP00709 142 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ADH4P08319 380 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 QDPRP09417 244 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 CALCBP10092 127 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 PSKH1P11801 424 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ANXA3P12429 323 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ELK1P19419 428 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 FUT1P19526 365 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 RAB3BP20337 219 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 MAPK3P27361 379 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 AQP2P41181 271 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 CAPZA1P52907 286 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 AP2S1P53680 142 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 ARPC4P59998 168 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 DHODHQ02127 395 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 MXD1Q05195 221 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 BAMBIQ13145 260 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 CHRFAM7AQ494W8 412 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 C4orf48Q5BLP8 95 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 TMEM255AQ5JRV8 349 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 UBE2NLQ5JXB2 153 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ZBTB37Q5TC79 503 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 VHLLQ6RSH7 139 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 SPATC1Q76KD6 591 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 BTN2A1Q7KYR7 527 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 LHFPL3Q86UP9 236 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 CPOQ8IVL8 374 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 PAQR4Q8N4S7 273 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 SPICQ8N5J4 248 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 C10orf53Q8N6V4 93 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 SLC37A3Q8NCC5 494 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 MOSPD2Q8NHP6 518 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 SMIM4Q8WVI0 70 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 UPRTQ96BW1 309 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 MSI2Q96DH6 328 aaKnown RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 DCLRE1CQ96SD1 692 aaKnown RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 TMPRSS13Q9BYE2 586 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ABCG5Q9H222 651 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 MMP28Q9H239 520 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 ADGRL4Q9HBW9 690 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 TMEM165Q9HC07 324 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 RANGRFQ9HD47 186 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 MED9Q9NWA0 146 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 NKIRAS2Q9NYR9 191 aa5.88□□□□□ -1.47
SPG11-224ENST00000561268 NUFIP1Q9UHK0 495 aaKnown RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 ZNF107Q9UII5 783 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 ELF5Q9UKW6 265 aaPredicted RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 RBMX2Q9Y388 322 aaKnown RBP5.88□□□□□ -1.47
SPG11-224ENST00000561268 SLC22A23A1A5C7 686 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 SNRPGP15A8MWD9 76 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 BLOC1S5-TXNDC5H3BN57 136 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 GABARAPH6UMI1 98 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 CDC42EP2O14613 210 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 PHYHO14832 338 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 LMX1BO60663 402 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 RGS11O94810 467 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 NDUFB2O95178 105 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 OR6A2O95222 327 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 FARS2O95363 451 aaKnown RBP5.87□□□□□ -1.47
SPG11-224ENST00000561268 SLC2A10O95528 541 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 F13BP05160 661 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 CLEC2LP0C7M8 214 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 PATE4P0C8F1 98 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 CD79AP11912 226 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 DAOP14920 347 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 MAKP20794 623 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 ACHEP22303 614 aa5.87□□□□□ -1.47
SPG11-224ENST00000561268 AZGP1P25311 298 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms