RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 CANT1Q8WVQ1 401 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 DMRTB1Q96MA1 342 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 RTL8AQ9BWD3 113 aa13.37□□□□□ -0.27
SNX1-213ENST00000561026 A0A0U1RQK1 487 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 A0A1B0GVI7 797 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 AQP12BA6NM10 295 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 GNGT2O14610 69 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 GPR37O15354 613 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 PRODHO43272 600 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 KCNAB3O43448 404 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 NDUFB3O43676 98 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 CST4P01036 141 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 HMGN1P05114 100 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 OSMP13725 252 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 AMY2BP19961 511 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 TGM4P49221 684 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 RPL15P61313 204 aaKnown RBP13.36□□□□□ -0.27
SNX1-213ENST00000561026 CDK5Q00535 292 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 FAM76BQ5HYJ3 339 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 VMO1Q7Z5L0 202 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 CPOQ8IVL8 374 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 AQP12AQ8IXF9 295 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 PIP4P2Q8N4L2 257 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 SCCPDHQ8NBX0 429 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 OR5T2Q8NGG2 359 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 WFDC12Q8WWY7 111 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 OR5P3Q8WZ94 311 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 LYZL4Q96KX0 146 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 THTPAQ9BU02 230 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 ABCB9Q9NP78 766 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 HAO2Q9NYQ3 351 aa13.36□□□□□ -0.27
SNX1-213ENST00000561026 TMEM210A6NLX4 147 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 ZNF850A8MQ14 1090 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 HOXB6P17509 224 aaKnown RBP13.35□□□□□ -0.27
SNX1-213ENST00000561026 IER3P46695 156 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 PRDX4Q13162 271 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 IKZF1Q13422 519 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 OLFML2AQ68BL7 652 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 STUMQ69YW2 141 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 C17orf107Q6ZR85 190 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 LDLRAD3Q86YD5 345 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 HS3ST5Q8IZT8 346 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 OR10Z1Q8NGY1 313 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 DYRK2Q92630 601 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 RPL3LQ92901 407 aaKnown RBP13.35□□□□□ -0.27
SNX1-213ENST00000561026 PKP2Q99959 881 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 WDR13Q9H1Z4 485 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 NIPAL2Q9H841 368 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 ZNF556Q9HAH1 456 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 ONECUT1Q9UBC0 465 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 ZNF391Q9UJN7 358 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 KLHDC2Q9Y2U9 406 aa13.35□□□□□ -0.27
SNX1-213ENST00000561026 CLPSL1A2RUU4 121 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 E2F6O75461 281 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 IGHV4-59P01825 116 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 ALOX5APP20292 161 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 PRKACGP22612 351 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 PSMA6P60900 246 aaKnown RBP13.34□□□□□ -0.27
SNX1-213ENST00000561026 GMFBP60983 142 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 SRSF4Q08170 494 aaKnown RBP13.34□□□□□ -0.27
SNX1-213ENST00000561026 LRRC10Q5BKY1 277 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 SLC35D3Q5M8T2 416 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
SNX1-213ENST00000561026 BBS1Q8NFJ9 593 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 OR8B12Q8NGG6 310 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 PIGCQ92535 297 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 RNF170Q96K19 258 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 RAB3IPQ96QF0 476 aaPredicted RBP13.34□□□□□ -0.27
SNX1-213ENST00000561026 DCTN5Q9BTE1 182 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 FGF23Q9GZV9 251 aaPredicted RBP13.34□□□□□ -0.27
SNX1-213ENST00000561026 DNTTIP1Q9H147 329 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 DNAJB11Q9UBS4 358 aa13.34□□□□□ -0.27
SNX1-213ENST00000561026 ANXA8P13928 327 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 SLC2A5P22732 501 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 KCTD8Q6ZWB6 473 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 KRT74Q7RTS7 529 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 CMTM4Q8IZR5 234 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 C8orf46Q8TAG6 207 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 NPRL2Q8WTW4 380 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 HPSE2Q8WWQ2 592 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 MED30Q96HR3 178 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 SNTG1Q9NSN8 517 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 FAM96BQ9Y3D0 163 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 LRP12Q9Y561 859 aa13.33□□□□□ -0.27
SNX1-213ENST00000561026 AKR7A2O43488 359 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 GPR137BO60478 399 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 SELLP14151 372 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 DCTDP32321 178 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 HCCSP53701 268 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 RPS7P62081 194 aaKnown RBP13.32□□□□□ -0.28
SNX1-213ENST00000561026 TMEM236Q5W0B7 351 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 DEGS2Q6QHC5 323 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 ZNF788Q6ZQV5 615 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 KRT77Q7Z794 578 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 ZDHHC23Q8IYP9 409 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 Q8N7P7 452 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 ANGPTL6Q8NI99 470 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 HIST1H2AAQ96QV6 131 aa13.32□□□□□ -0.28
SNX1-213ENST00000561026 CITED1Q99966 193 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms